HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:73.5 nTPM
HPA Brain:200.7 nTPM
GTEx:73.5 nTPM
FANTOM5:51.0 Scaled Tags Per Million
Pig:100.1 nTPM
Mouse:108.8 nTPM
Allen mouse:2.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043245
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 200.7
Sample id Sample description nTPM
Hippocampus
nTPM: 95.5
1898 Male, age 80, left hemisphere 114.7
2529 Female, age 94, left hemisphere 102.9
2148 Female, age 91, left hemisphere 102.6
2621 Female, age 67, right hemisphere 100.9
1855 Male, age 76, left hemisphere 82.1
1911 Female, age 85, right hemisphere 69.8
Dentate gyrus
nTPM: 115.9
1927 Female, age 91, both hemispheres 150.1
2246 Female, age 85, both hemispheres 139.3
2531 Female, age 67, both hemispheres 137.5
2528 Male, age 74, both hemispheres 125.0
2530 Female, age 94, left hemisphere 81.8
2010 Male, age 76, both hemispheres 61.5
Entorhinal gyrus
nTPM: 184.1
2613 Female, age 94, left hemisphere 318.0
2764 Male, age 80, right hemisphere 187.4
1787 Male, age 76, left hemisphere 178.4
1938 Female, age 85, left hemisphere 172.8
2686 Male, age 75, right hemisphere 143.2
2117 Female, age 91, right hemisphere 105.0
Hippocampus, CA1
nTPM: 99.2
2082 Female, age 91, right hemisphere 141.5
2045 Male, age 76, both hemispheres 123.6
1873 Female, age 85, both hemispheres 94.6
2527 Male, age 74, both hemispheres 81.6
2749 Male, age 80, left hemisphere 54.7
Hippocampus, CA2
nTPM: 79.5
2113 Female, age 91, right hemisphere 101.8
1892 Male, age 76, both hemispheres 91.6
1963 Male, age 80, left hemisphere 87.5
2437 Female, age 94, left hemisphere 75.2
2249 Male, age 74, both hemispheres 68.1
1940 Female, age 85, left hemisphere 52.6
Hippocampus, CA3
nTPM: 97.0
2861 Female, age 67, both hemispheres 148.1
2620 Female, age 94, left hemisphere 133.3
2436 Male, age 74, both hemispheres 101.0
1867 Male, age 76, both hemispheres 68.9
1891 Female, age 85, both hemispheres 67.6
2137 Male, age 80, left hemisphere 63.2
Parahippocampal cortex
nTPM: 141.9
1933 Female, age 85, both hemispheres 169.3
1990 Female, age 91, right hemisphere 165.2
2693 Female, age 94, both hemispheres 147.5
2245 Female, age 91, both hemispheres 146.6
1850 Male, age 80, both hemispheres 146.4
2622 Female, age 67, right hemisphere 144.0
2250 Female, age 67, right hemisphere 134.9
2532 Female, age 72, left hemisphere 125.9
2692 Male, age 74, both hemispheres 124.0
2018 Male, age 76, both hemispheres 114.7
Perirhinal gyrus
nTPM: 200.7
1847 Female, age 91, left hemisphere 277.6
1841 Female, age 85, right hemisphere 197.7
2848 Male, age 76, right hemisphere 195.2
1794 Male, age 80, right hemisphere 181.0
2521 Female, age 94, right hemisphere 152.2
Subiculum
nTPM: 95.4
1977 Female, age 85, both hemispheres 174.9
2619 Male, age 74, both hemispheres 99.5
2729 Female, age 91, right hemisphere 97.8
2042 Male, age 76, both hemispheres 70.1
2438 Female, age 94, left hemisphere 66.4
1901 Male, age 80, both hemispheres 63.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 73.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.5
Samples: 255

Max nTPM: 318.3
Min nTPM: 19.4
Std nTPM: 42.8
Median nTPM: 61.6
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 318.3
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 257.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 231.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 206.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 206.2
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 187.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 184.0
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 177.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 173.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 173.3
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 164.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 51.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.0
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 50.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 100.1
Pig sample Sample description nTPM
Subiculum
nTPM: 100.1
Samples: 4

Max nTPM: 111.0
Min nTPM: 83.3
Sample A Female 111.0
Sample B Female 100.7
Sample C Male 83.3
Sample D Male 105.3
Dorsal hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 43.2
Min nTPM: 17.4
Sample A Female 26.3
Sample B Female 43.2
Sample C Male 19.3
Sample D Male 17.4
Entorhinal cortex
nTPM: 98.8
Samples: 4

Max nTPM: 124.0
Min nTPM: 66.9
Sample A Female 124.0
Sample B Female 81.3
Sample C Male 123.0
Sample D Male 66.9
Ventral hippocampus
nTPM: 60.3
Samples: 4

Max nTPM: 106.5
Min nTPM: 18.2
Sample A Female 53.0
Sample B Female 63.5
Sample C Male 106.5
Sample D Male 18.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 108.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.8
Samples: 4

Max nTPM: 180.9
Min nTPM: 69.7
Sample A Male 69.7
Sample B Male 75.3
Sample C Female 109.3
Sample D Female 180.9
Hippocampal formation
nTPM: 64.0
Samples: 4

Max nTPM: 80.5
Min nTPM: 51.1
Sample A Male 80.5
Sample B Male 57.4
Sample C Female 51.1
Sample D Female 66.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
74581395 Antisense, RP_060117_02_C04, Mouse strain C57BL/6J (56 days, male) 3.0
69080026 Antisense, RP_050324_01_E04, Mouse strain C57BL/6J (56 days, male) 1.1

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