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  • NFE2L2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:65.5 nTPM
HPA Brain:101.0 nTPM
GTEx:65.5 nTPM
FANTOM5:160.8 Scaled Tags Per Million
Pig:100.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 101.0
2048 Male, age 55, midline 112.5
1981 Female, age 72, midline 102.1
2816 Male, age 47, midline 101.6
2194 Female, age 79, both hemispheres 100.0
2565 Male, age 75, midline 88.7
Cervical spinal cord, dorsal horn
nTPM: 100.2
2296 Male, age 66, both hemispheres 122.3
2173 Female, age 72, unknown 107.9
2069 Male, age 47, both hemispheres 99.9
1877 Male, age 55, unknown 93.2
2721 Male, age 90, both hemispheres 92.7
2297 Male, age 75, both hemispheres 85.3
Cervical spinal cord, ventral horn
nTPM: 97.0
2098 Female, age 72, unknown 122.7
2820 Female, age 79, both hemispheres 101.7
2068 Male, age 55, unknown 94.7
2809 Male, age 90, both hemispheres 93.3
2295 Male, age 66, both hemispheres 89.0
2480 Male, age 75, both hemispheres 80.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 65.5
Samples: 204

Max nTPM: 133.4
Min nTPM: 30.2
Std nTPM: 13.2
Median nTPM: 64.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 133.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 124.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 96.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 95.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 91.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 89.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 88.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 87.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 87.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 87.5
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 85.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 84.7
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 84.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 83.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 83.8
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 83.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 82.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 82.4
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 81.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 81.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 81.2
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 80.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 80.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 80.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 79.9
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 79.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 79.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 78.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 78.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 78.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 78.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 78.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 77.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 76.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 76.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 75.8
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 75.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 75.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 75.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 75.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 74.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 74.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 74.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 74.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 74.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 73.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 73.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 73.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 72.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 72.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 72.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 72.3
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 72.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 72.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 71.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 71.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 71.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 71.5
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 71.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 71.4
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 71.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 70.8
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 70.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 70.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 70.1
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 70.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 69.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 69.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 69.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 69.2
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 69.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 69.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 68.6
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 68.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 68.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 68.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 68.3
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 68.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 68.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 68.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 67.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 67.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 67.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 67.4
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 67.3
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 67.1
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 67.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 67.0
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 66.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 66.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 66.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 66.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 66.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 66.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 66.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 66.0
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 65.9
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 65.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 65.2
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 65.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 65.1
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 64.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 64.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 64.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 64.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 64.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 64.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 64.2
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 64.0
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 64.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 63.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 63.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 63.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 63.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 63.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 63.1
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 62.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 62.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 62.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 62.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 62.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 61.9
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 61.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 61.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 61.2
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 61.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 61.1
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 61.1
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 60.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 60.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 60.7
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 60.5
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 60.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 60.2
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 60.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 59.9
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 59.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 59.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 59.5
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 59.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 59.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 59.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 58.9
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 58.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 58.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 58.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 58.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 58.2
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 57.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 57.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 57.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 57.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 57.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 56.8
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 56.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 56.1
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 55.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 55.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 55.5
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 55.5
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 55.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 55.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 55.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 55.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 55.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 54.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 54.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 54.3
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 54.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 54.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 53.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 53.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 53.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 53.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 52.7
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 51.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 51.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 51.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 51.7
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 51.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 51.1
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 50.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 50.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 50.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 50.2
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 49.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 49.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 49.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 49.5
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 49.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 47.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 45.5
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 45.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 45.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 45.2
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 44.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 43.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 43.3
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 43.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 42.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 40.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 40.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 37.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 30.2
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

160.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 160.8
FF:10159-103A6 76 years, female 185.7
FF:10181-103D1 60 years, female 135.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 100.0
Samples: 4

Max nTPM: 122.1
Min nTPM: 76.9
Sample A Female 76.9
Sample B Female 122.1
Sample C Male 117.3
Sample D Male 83.8
Ventral spinal cord
nTPM: 96.9
Samples: 4

Max nTPM: 105.7
Min nTPM: 90.7
Sample A Female 93.5
Sample B Female 97.8
Sample C Male 90.7
Sample D Male 105.7

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