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RPL22
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  • TISSUE

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  • RPL22
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Amygdala
Brain methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:363.4 nTPM
HPA Brain:114.0 nTPM
GTEx:363.4 nTPM
FANTOM5:180.6 Scaled Tags Per Million
Pig:269.8 nTPM
Mouse:210.9 nTPM
Allen mouse:9.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.0
Sample id Sample description nTPM
Amygdala
nTPM: 114.0
2695 Female, age 67, right hemisphere 149.9
2514 Male, age 75, right hemisphere 125.3
2517 Female, age 94, left hemisphere 101.5
2814 Male, age 76, right hemisphere 98.2
1987 Female, age 91, left hemisphere 94.9
Basal amygdala
nTPM: 95.5
2827 Female, age 67, right hemisphere 131.2
2609 Male, age 75, right hemisphere 106.7
2685 Female, age 94, left hemisphere 90.8
2110 Male, age 80, left hemisphere 84.1
1955 Male, age 76, both hemispheres 82.9
2243 Female, age 91, right hemisphere 77.4
Central amygdala
nTPM: 107.5
2826 Female, age 94, left hemisphere 187.1
2515 Male, age 75, right hemisphere 98.1
1905 Male, age 76, both hemispheres 86.9
2239 Male, age 80, left hemisphere 84.1
2701 Female, age 91, right hemisphere 81.3
Corticomedial amygdala
nTPM: 95.7
2428 Male, age 75, right hemisphere 103.4
2535 Female, age 67, right hemisphere 103.2
2829 Male, age 80, left hemisphere 97.4
2240 Male, age 76, both hemispheres 93.5
2242 Female, age 91, right hemisphere 91.8
2429 Female, age 94, left hemisphere 85.1
Lateral amygdala
nTPM: 105.6
2830 Female, age 67, right hemisphere 151.9
2534 Female, age 94, left hemisphere 121.7
2516 Male, age 75, right hemisphere 121.5
2256 Male, age 80, left hemisphere 90.9
1883 Male, age 76, both hemispheres 83.9
2255 Female, age 91, right hemisphere 63.5

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

363.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 363.4
Samples: 181

Max nTPM: 898.6
Min nTPM: 184.7
Std nTPM: 114.6
Median nTPM: 343.2
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 898.6
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 856.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 841.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 761.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 697.4
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 680.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 663.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 594.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 594.2
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 580.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 570.3
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 565.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 560.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 558.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 496.3
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 491.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 489.5
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 489.2
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 482.0
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 480.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 470.4
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 465.9
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 459.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 455.8
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 454.1
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 451.0
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 446.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 443.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 438.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 425.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 424.9
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 424.8
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 423.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 420.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 419.8
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 419.0
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 418.4
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 408.7
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 407.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 404.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 401.4
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 401.3
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 401.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 397.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 392.5
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 389.9
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 389.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 387.4
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 386.5
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 386.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 384.8
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 384.4
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 384.3
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 383.7
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 381.9
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 379.9
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 378.3
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 376.2
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 374.9
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 374.1
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 372.6
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 372.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 371.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 369.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 369.4
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 367.8
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 367.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 366.6
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 366.3
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 366.1
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 365.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 364.5
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 364.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 364.3
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 363.8
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 362.5
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 362.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 361.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 359.5
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 356.6
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 355.6
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 352.8
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 352.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 351.8
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 351.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 351.4
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 350.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 350.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 346.9
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 345.1
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 343.2
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 341.3
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 339.9
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 338.5
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 337.2
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 336.2
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 335.6
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 334.7
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 332.8
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 332.8
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 332.5
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 331.3
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 330.9
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 330.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 325.9
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 324.0
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 323.8
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 321.4
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 318.6
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 315.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 314.9
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 313.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 313.0
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 312.0
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 310.4
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 309.8
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 308.2
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 307.5
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 306.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 306.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 305.7
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 303.3
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 302.9
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 302.4
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 302.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 301.7
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 301.7
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 301.7
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 301.2
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 298.4
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 297.6
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 297.1
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 296.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 295.3
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 294.3
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 293.9
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 293.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 291.9
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 289.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 288.5
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 287.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 285.5
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 282.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 281.2
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 279.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 278.5
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 277.8
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 275.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 275.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 273.7
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 273.5
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 273.2
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 271.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 269.7
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 268.1
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 268.1
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 263.6
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 263.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 263.1
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 262.9
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 262.0
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 261.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 260.6
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 260.1
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 257.4
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 256.4
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 256.0
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 254.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 249.0
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 247.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 247.1
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 246.6
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 245.4
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 242.3
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 239.7
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 222.8
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 216.1
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 210.8
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 207.6
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 197.6
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 184.7
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

180.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 180.6
FF:10151-102I7 76 years, female 180.6

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

269.8
Pig sample Sample description nTPM
Amygdala
nTPM: 269.9
Samples: 4

Max nTPM: 365.8
Min nTPM: 145.6
Sample A Female 309.9
Sample B Female 365.8
Sample C Male 258.1
Sample D Male 145.6

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 210.9
Samples: 4

Max nTPM: 221.7
Min nTPM: 206.5
Sample A Male 206.5
Sample B Male 208.5
Sample C Female 221.7
Sample D Female 206.8

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.0
68445143 Antisense, RP_050111_02_H03, Mouse strain C57BL/6J (56 days, male) 9.0

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