HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:325.1 nTPM
HPA Brain:94.8 nTPM
GTEx:325.1 nTPM
FANTOM5:234.4 Scaled Tags Per Million
Pig:317.7 nTPM
Mouse:221.4 nTPM
Allen mouse:11.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 94.8
Sample id Sample description nTPM
Hippocampus
nTPM: 94.8
1898 Male, age 80, left hemisphere 107.6
2529 Female, age 94, left hemisphere 102.1
1911 Female, age 85, right hemisphere 92.9
2621 Female, age 67, right hemisphere 91.0
1855 Male, age 76, left hemisphere 89.6
2148 Female, age 91, left hemisphere 86.0
Dentate gyrus
nTPM: 89.7
2530 Female, age 94, left hemisphere 131.4
2010 Male, age 76, both hemispheres 102.3
2531 Female, age 67, both hemispheres 84.3
2246 Female, age 85, both hemispheres 83.5
1927 Female, age 91, both hemispheres 81.9
2528 Male, age 74, both hemispheres 54.9
Entorhinal gyrus
nTPM: 85.5
2686 Male, age 75, right hemisphere 108.2
1938 Female, age 85, left hemisphere 87.2
1787 Male, age 76, left hemisphere 86.9
2764 Male, age 80, right hemisphere 85.1
2117 Female, age 91, right hemisphere 81.2
2613 Female, age 94, left hemisphere 64.3
Hippocampus, CA1
nTPM: 91.6
2749 Male, age 80, left hemisphere 113.9
1873 Female, age 85, both hemispheres 94.2
2045 Male, age 76, both hemispheres 93.4
2527 Male, age 74, both hemispheres 84.5
2082 Female, age 91, right hemisphere 71.8
Hippocampus, CA2
nTPM: 92.9
1892 Male, age 76, both hemispheres 123.3
1963 Male, age 80, left hemisphere 101.7
2437 Female, age 94, left hemisphere 96.4
1940 Female, age 85, left hemisphere 90.0
2249 Male, age 74, both hemispheres 75.8
2113 Female, age 91, right hemisphere 70.0
Hippocampus, CA3
nTPM: 83.0
1867 Male, age 76, both hemispheres 103.9
1891 Female, age 85, both hemispheres 99.8
2137 Male, age 80, left hemisphere 98.0
2861 Female, age 67, both hemispheres 73.7
2436 Male, age 74, both hemispheres 73.6
2620 Female, age 94, left hemisphere 48.7
Parahippocampal cortex
nTPM: 81.5
2018 Male, age 76, both hemispheres 102.9
1850 Male, age 80, both hemispheres 94.5
2245 Female, age 91, both hemispheres 91.9
1990 Female, age 91, right hemisphere 84.7
2250 Female, age 67, right hemisphere 81.6
1933 Female, age 85, both hemispheres 80.7
2532 Female, age 72, left hemisphere 80.1
2692 Male, age 74, both hemispheres 78.3
2693 Female, age 94, both hemispheres 61.8
2622 Female, age 67, right hemisphere 59.0
Perirhinal gyrus
nTPM: 87.6
1841 Female, age 85, right hemisphere 95.1
1847 Female, age 91, left hemisphere 91.7
1794 Male, age 80, right hemisphere 91.2
2848 Male, age 76, right hemisphere 91.2
2521 Female, age 94, right hemisphere 68.8
Subiculum
nTPM: 86.9
1901 Male, age 80, both hemispheres 109.2
2438 Female, age 94, left hemisphere 96.0
1977 Female, age 85, both hemispheres 93.7
2042 Male, age 76, both hemispheres 91.0
2619 Male, age 74, both hemispheres 68.0
2729 Female, age 91, right hemisphere 63.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 325.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 325.1
Samples: 255

Max nTPM: 752.3
Min nTPM: 186.3
Std nTPM: 94.0
Median nTPM: 304.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 752.3
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 748.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 731.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 638.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 603.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 573.4
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 551.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 536.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 535.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 532.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 509.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 234.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 234.4
FF:10169-103B7 60 years, female 294.9
FF:10153-102I9 76 years, female 173.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 317.7
Pig sample Sample description nTPM
Subiculum
nTPM: 259.2
Samples: 4

Max nTPM: 370.7
Min nTPM: 202.8
Sample A Female 370.7
Sample B Female 239.7
Sample C Male 202.8
Sample D Male 223.7
Dorsal hippocampus
nTPM: 317.7
Samples: 4

Max nTPM: 416.6
Min nTPM: 227.6
Sample A Female 416.6
Sample B Female 271.6
Sample C Male 354.9
Sample D Male 227.6
Entorhinal cortex
nTPM: 261.1
Samples: 4

Max nTPM: 354.4
Min nTPM: 189.9
Sample A Female 214.3
Sample B Female 354.4
Sample C Male 285.7
Sample D Male 189.9
Ventral hippocampus
nTPM: 259.2
Samples: 4

Max nTPM: 278.0
Min nTPM: 232.4
Sample A Female 278.0
Sample B Female 232.4
Sample C Male 260.9
Sample D Male 265.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 221.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 206.8
Samples: 4

Max nTPM: 219.4
Min nTPM: 180.5
Sample A Male 211.5
Sample B Male 219.4
Sample C Female 215.7
Sample D Female 180.5
Hippocampal formation
nTPM: 221.5
Samples: 4

Max nTPM: 247.6
Min nTPM: 196.0
Sample A Male 247.6
Sample B Male 216.9
Sample C Female 225.3
Sample D Female 196.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68445143 Antisense, RP_050111_02_H03, Mouse strain C57BL/6J (56 days, male) 11.1

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