HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.6 nTPM
HPA Brain:113.1 nTPM
GTEx:40.6 nTPM
FANTOM5:112.8 Scaled Tags Per Million
Pig:59.4 nTPM
Mouse:39.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 113.1
Sample id Sample description nTPM
Hippocampus
nTPM: 86.3
2621 Female, age 67, right hemisphere 108.7
2148 Female, age 91, left hemisphere 98.3
1898 Male, age 80, left hemisphere 86.3
1855 Male, age 76, left hemisphere 81.4
1911 Female, age 85, right hemisphere 72.2
2529 Female, age 94, left hemisphere 70.8
Dentate gyrus
nTPM: 85.6
2531 Female, age 67, both hemispheres 128.5
1927 Female, age 91, both hemispheres 98.7
2528 Male, age 74, both hemispheres 89.7
2246 Female, age 85, both hemispheres 70.1
2530 Female, age 94, left hemisphere 67.1
2010 Male, age 76, both hemispheres 59.3
Entorhinal gyrus
nTPM: 110.0
2613 Female, age 94, left hemisphere 146.4
2686 Male, age 75, right hemisphere 144.7
2764 Male, age 80, right hemisphere 107.4
1938 Female, age 85, left hemisphere 93.4
1787 Male, age 76, left hemisphere 88.6
2117 Female, age 91, right hemisphere 79.3
Hippocampus, CA1
nTPM: 92.9
2527 Male, age 74, both hemispheres 115.8
2749 Male, age 80, left hemisphere 110.2
2082 Female, age 91, right hemisphere 94.2
1873 Female, age 85, both hemispheres 74.5
2045 Male, age 76, both hemispheres 69.9
Hippocampus, CA2
nTPM: 80.9
2437 Female, age 94, left hemisphere 95.0
1892 Male, age 76, both hemispheres 92.0
1963 Male, age 80, left hemisphere 84.0
2113 Female, age 91, right hemisphere 82.5
2249 Male, age 74, both hemispheres 79.9
1940 Female, age 85, left hemisphere 51.8
Hippocampus, CA3
nTPM: 98.3
2861 Female, age 67, both hemispheres 154.4
2620 Female, age 94, left hemisphere 116.9
2137 Male, age 80, left hemisphere 105.8
2436 Male, age 74, both hemispheres 84.1
1867 Male, age 76, both hemispheres 70.0
1891 Female, age 85, both hemispheres 58.8
Parahippocampal cortex
nTPM: 105.9
2622 Female, age 67, right hemisphere 146.2
2693 Female, age 94, both hemispheres 137.1
2245 Female, age 91, both hemispheres 124.5
2250 Female, age 67, right hemisphere 109.6
2692 Male, age 74, both hemispheres 107.2
1933 Female, age 85, both hemispheres 94.5
1850 Male, age 80, both hemispheres 91.2
2532 Female, age 72, left hemisphere 86.8
1990 Female, age 91, right hemisphere 85.9
2018 Male, age 76, both hemispheres 75.7
Perirhinal gyrus
nTPM: 113.1
1847 Female, age 91, left hemisphere 129.5
2521 Female, age 94, right hemisphere 118.4
2848 Male, age 76, right hemisphere 114.2
1794 Male, age 80, right hemisphere 105.3
1841 Female, age 85, right hemisphere 98.2
Subiculum
nTPM: 75.3
2619 Male, age 74, both hemispheres 93.1
2438 Female, age 94, left hemisphere 83.0
2729 Female, age 91, right hemisphere 82.3
1977 Female, age 85, both hemispheres 72.3
1901 Male, age 80, both hemispheres 71.2
2042 Male, age 76, both hemispheres 50.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.6
Samples: 255

Max nTPM: 97.2
Min nTPM: 0.5
Std nTPM: 21.0
Median nTPM: 40.0
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 97.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 96.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 93.7
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 92.9
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 92.7
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 89.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 82.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 81.1
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 79.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 78.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 78.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 112.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.8
FF:10169-103B7 60 years, female 117.3
FF:10153-102I9 76 years, female 108.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 59.4
Pig sample Sample description nTPM
Subiculum
nTPM: 50.0
Samples: 4

Max nTPM: 68.0
Min nTPM: 38.0
Sample A Female 68.0
Sample B Female 43.9
Sample C Male 50.1
Sample D Male 38.0
Dorsal hippocampus
nTPM: 39.1
Samples: 4

Max nTPM: 46.9
Min nTPM: 27.9
Sample A Female 45.2
Sample B Female 46.9
Sample C Male 36.3
Sample D Male 27.9
Entorhinal cortex
nTPM: 59.4
Samples: 4

Max nTPM: 65.4
Min nTPM: 55.3
Sample A Female 60.1
Sample B Female 55.3
Sample C Male 65.4
Sample D Male 56.7
Ventral hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 60.9
Min nTPM: 36.0
Sample A Female 40.2
Sample B Female 36.0
Sample C Male 60.9
Sample D Male 47.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 39.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 51.5
Min nTPM: 35.2
Sample A Male 36.0
Sample B Male 36.5
Sample C Female 35.2
Sample D Female 51.5
Hippocampal formation
nTPM: 23.0
Samples: 4

Max nTPM: 26.6
Min nTPM: 20.7
Sample A Male 21.6
Sample B Male 26.6
Sample C Female 20.7
Sample D Female 23.2

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