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  • TISSUE

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  • PADI2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:50.8 nTPM
HPA Brain:317.5 nTPM
GTEx:50.8 nTPM
Pig:166.0 nTPM
Mouse:16.3 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

317.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 39.0
2226 Male, age 75, left hemisphere 47.1
1961 Female, age 42, unknown 30.9
Dorsomedial nucleus
nTPM: 116.2
1989 Male, age 62, unknown 144.3
2017 Female, age 42, unknown 141.7
2041 Female, age 72, unknown 62.6
Lateral hypothalamic area
nTPM: 136.6
2271 Male, age 75, both hemispheres 171.0
1791 Male, age 80, right hemisphere 138.3
2228 Male, age 66, unknown 131.1
2412 Male, age 62, unknown 106.1
Mammillary body
nTPM: 317.5
1834 Female, age 42, unknown 377.7
1923 Female, age 72, unknown 339.1
2413 Male, age 66, unknown 333.7
1948 Female, age 72, unknown 280.9
1945 Male, age 80, right hemisphere 256.0
Paraventricular nucleus
nTPM: 165.7
2700 Male, age 62, unknown 165.7
Preoptic area
nTPM: 131.6
2414 Female, age 72, unknown 211.6
1861 Female, age 42, unknown 146.6
1907 Male, age 80, right hemisphere 36.7
Supraoptic nucleus
nTPM: 229.4
2043 Male, age 62, unknown 284.9
1894 Female, age 72, unknown 258.2
2835 Female, age 72, unknown 145.2
Ventromedial nucleus
nTPM: 34.9
1982 Female, age 72, unknown 39.5
1822 Female, age 42, unknown 30.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 50.8
Samples: 257

Max nTPM: 201.8
Min nTPM: 7.3
Std nTPM: 37.6
Median nTPM: 37.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 201.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 201.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 196.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 193.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 176.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 171.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 149.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 147.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 145.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 140.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 138.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 136.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 133.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 132.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 130.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 127.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 120.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 115.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 115.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 114.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 113.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 112.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 107.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 103.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 102.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 100.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 99.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 99.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 98.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 95.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 95.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 95.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 95.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 94.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 93.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 92.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 92.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 89.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 87.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 85.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 83.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 81.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 81.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 81.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 79.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 75.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 75.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 73.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 70.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 70.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 69.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 69.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 69.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 69.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 68.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 67.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 66.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 66.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 65.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 65.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 64.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 64.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 64.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 64.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 63.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 63.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 63.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 63.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 62.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 62.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 60.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 59.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 59.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 59.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 59.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 59.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 58.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 57.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 55.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 55.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 55.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 54.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 53.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 53.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 53.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 53.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 52.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 52.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 50.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 50.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 50.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 50.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 49.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 49.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 48.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 48.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 48.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 48.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 48.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 48.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 47.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 47.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 46.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 45.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 45.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 44.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 43.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 43.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 42.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 42.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 42.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 42.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 41.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 41.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 41.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 41.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 41.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 40.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 40.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 40.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 39.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 39.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 39.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 38.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 38.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 37.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 37.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 37.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 37.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 37.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 37.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 37.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 37.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 37.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 37.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 36.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 36.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 36.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 36.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 36.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 36.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 35.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 35.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 35.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 35.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 35.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 35.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 34.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 34.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 33.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 33.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 33.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 33.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 32.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 32.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 32.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 32.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 32.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 31.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 31.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 31.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 31.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 30.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 30.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 30.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 30.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 29.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 29.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 29.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 29.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 28.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 28.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 28.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 28.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 27.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 27.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 27.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 27.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 27.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 27.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 27.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 26.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 26.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 26.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 25.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 25.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 25.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 25.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 25.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 25.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 25.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 24.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 24.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 24.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 24.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 24.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 23.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 23.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 23.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 22.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 22.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 22.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 22.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 22.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 22.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 21.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 21.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 21.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 21.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 21.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 21.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 20.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 20.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 20.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 20.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 20.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 20.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 20.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 20.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 19.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 19.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 18.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 18.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 18.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 18.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 18.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 18.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 18.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 18.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 18.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 18.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 17.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 17.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 17.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 17.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 17.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 17.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 17.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 17.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 16.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 16.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 16.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 15.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 15.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 15.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 14.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 14.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 14.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 12.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 12.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 12.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 11.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 10.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 9.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 7.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 166.0
Samples: 4

Max nTPM: 205.2
Min nTPM: 79.6
Sample A Female 201.0
Sample B Female 205.2
Sample C Male 178.2
Sample D Male 79.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 16.3
Samples: 4

Max nTPM: 20.1
Min nTPM: 13.4
Sample A Male 13.4
Sample B Male 15.2
Sample C Female 16.5
Sample D Female 20.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.2
69013438 Antisense, RP_050309_02_D07, Mouse strain C57BL/6J (56 days, male) 1.2

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