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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:518.4 nTPM
HPA Brain:434.8 nTPM
GTEx:518.4 nTPM
Pig:96.7 nTPM
Mouse:371.3 nTPM
Allen mouse:3.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

434.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 311.5
2226 Male, age 75, left hemisphere 320.1
1961 Female, age 42, unknown 302.9
Dorsomedial nucleus
nTPM: 322.6
2041 Female, age 72, unknown 336.6
1989 Male, age 62, unknown 318.0
2017 Female, age 42, unknown 313.2
Lateral hypothalamic area
nTPM: 335.7
1791 Male, age 80, right hemisphere 435.2
2271 Male, age 75, both hemispheres 378.5
2228 Male, age 66, unknown 280.4
2412 Male, age 62, unknown 248.7
Mammillary body
nTPM: 387.1
1923 Female, age 72, unknown 416.6
1945 Male, age 80, right hemisphere 411.2
1834 Female, age 42, unknown 394.9
2413 Male, age 66, unknown 376.4
1948 Female, age 72, unknown 336.7
Paraventricular nucleus
nTPM: 239.5
2700 Male, age 62, unknown 239.5
Preoptic area
nTPM: 316.2
1861 Female, age 42, unknown 356.5
2414 Female, age 72, unknown 296.9
1907 Male, age 80, right hemisphere 295.2
Supraoptic nucleus
nTPM: 434.8
1894 Female, age 72, unknown 544.7
2043 Male, age 62, unknown 440.0
2835 Female, age 72, unknown 319.8
Ventromedial nucleus
nTPM: 278.9
1822 Female, age 42, unknown 283.1
1982 Female, age 72, unknown 274.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

518.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 518.4
Samples: 257

Max nTPM: 1162.4
Min nTPM: 206.5
Std nTPM: 129.5
Median nTPM: 500.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1162.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1106.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1011.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 945.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 935.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 889.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 836.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 826.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 775.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 763.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 759.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 756.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 756.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 750.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 707.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 698.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 692.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 691.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 689.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 687.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 686.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 682.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 682.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 679.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 673.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 670.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 668.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 667.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 649.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 647.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 647.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 644.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 644.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 642.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 641.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 637.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 633.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 629.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 629.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 625.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 624.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 623.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 621.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 620.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 620.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 616.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 615.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 613.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 609.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 607.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 607.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 606.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 602.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 602.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 600.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 598.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 591.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 590.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 587.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 585.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 584.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 583.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 579.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 579.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 579.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 577.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 574.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 574.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 573.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 573.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 571.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 571.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 570.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 569.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 565.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 563.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 561.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 560.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 552.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 551.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 548.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 547.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 547.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 546.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 544.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 544.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 543.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 541.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 541.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 540.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 536.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 536.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 535.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 535.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 532.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 530.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 530.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 530.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 529.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 527.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 526.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 525.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 524.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 522.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 522.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 521.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 518.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 518.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 518.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 517.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 516.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 516.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 515.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 515.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 514.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 513.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 513.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 512.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 510.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 510.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 508.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 508.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 508.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 508.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 507.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 504.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 501.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 501.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 500.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 499.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 498.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 497.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 497.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 495.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 495.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 495.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 493.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 492.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 491.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 486.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 484.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 484.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 483.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 482.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 481.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 481.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 480.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 480.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 477.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 477.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 474.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 473.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 473.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 472.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 472.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 472.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 472.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 471.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 471.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 469.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 469.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 467.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 466.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 464.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 463.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 462.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 458.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 457.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 456.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 456.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 455.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 455.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 454.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 453.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 453.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 452.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 451.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 450.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 449.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 449.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 449.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 449.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 448.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 448.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 446.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 445.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 443.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 443.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 441.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 441.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 439.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 438.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 437.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 437.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 436.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 436.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 435.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 432.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 432.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 432.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 430.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 429.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 428.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 428.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 427.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 427.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 427.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 426.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 423.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 421.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 421.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 418.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 418.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 408.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 407.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 406.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 405.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 405.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 404.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 402.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 400.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 396.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 395.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 394.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 390.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 388.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 387.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 382.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 380.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 378.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 377.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 377.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 377.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 376.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 374.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 370.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 370.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 366.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 366.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 362.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 361.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 357.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 356.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 353.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 353.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 351.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 349.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 342.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 340.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 340.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 322.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 322.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 321.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 317.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 275.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 270.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 206.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 96.7
Samples: 4

Max nTPM: 112.5
Min nTPM: 72.6
Sample A Female 112.5
Sample B Female 109.1
Sample C Male 92.7
Sample D Male 72.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

371.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 371.3
Samples: 4

Max nTPM: 401.7
Min nTPM: 351.7
Sample A Male 351.7
Sample B Male 401.7
Sample C Female 374.4
Sample D Female 357.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.9
836 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 7.2
837 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 1.6
70795736 Antisense, RP_050712_01_H04, Mouse strain C57BL/6J (56 days, male) 0.7

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