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  • SUMMARY

  • TISSUE

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  • STMN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:705.3 nTPM
HPA Brain:569.5 nTPM
GTEx:705.3 nTPM
Pig:696.9 nTPM
Mouse:941.1 nTPM
Allen mouse:9.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

569.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 381.0
2226 Male, age 75, left hemisphere 474.2
1961 Female, age 42, unknown 287.9
Dorsomedial nucleus
nTPM: 336.8
1989 Male, age 62, unknown 432.8
2041 Female, age 72, unknown 303.2
2017 Female, age 42, unknown 274.3
Lateral hypothalamic area
nTPM: 569.5
2271 Male, age 75, both hemispheres 883.9
2228 Male, age 66, unknown 540.0
1791 Male, age 80, right hemisphere 510.6
2412 Male, age 62, unknown 343.6
Mammillary body
nTPM: 349.7
1945 Male, age 80, right hemisphere 410.7
2413 Male, age 66, unknown 357.7
1923 Female, age 72, unknown 345.5
1948 Female, age 72, unknown 344.4
1834 Female, age 42, unknown 290.1
Paraventricular nucleus
nTPM: 410.1
2700 Male, age 62, unknown 410.1
Preoptic area
nTPM: 388.9
2414 Female, age 72, unknown 480.8
1907 Male, age 80, right hemisphere 401.6
1861 Female, age 42, unknown 284.4
Supraoptic nucleus
nTPM: 425.9
2043 Male, age 62, unknown 502.9
2835 Female, age 72, unknown 394.9
1894 Female, age 72, unknown 379.8
Ventromedial nucleus
nTPM: 267.9
1822 Female, age 42, unknown 281.5
1982 Female, age 72, unknown 254.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

705.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 705.3
Samples: 257

Max nTPM: 1669.6
Min nTPM: 191.7
Std nTPM: 233.6
Median nTPM: 681.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1669.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1497.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1473.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1468.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 1351.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 1257.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1218.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1196.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1194.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1193.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1173.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1167.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1099.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1092.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1072.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1066.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 1065.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1064.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1059.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1057.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1054.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1042.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1028.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1026.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1016.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1015.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 992.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 973.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 971.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 966.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 954.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 948.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 947.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 947.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 945.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 943.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 938.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 936.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 924.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 923.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 920.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 913.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 901.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 895.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 892.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 891.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 889.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 885.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 867.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 866.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 859.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 850.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 850.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 848.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 847.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 843.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 843.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 840.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 839.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 837.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 831.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 829.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 827.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 825.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 824.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 820.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 816.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 815.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 812.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 810.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 809.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 806.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 805.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 803.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 799.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 798.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 796.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 796.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 792.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 790.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 784.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 783.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 776.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 776.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 775.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 773.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 772.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 769.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 768.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 768.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 767.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 767.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 764.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 761.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 761.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 758.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 757.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 756.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 755.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 752.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 749.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 747.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 744.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 740.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 740.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 731.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 730.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 721.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 720.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 720.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 720.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 720.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 719.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 719.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 719.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 717.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 715.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 714.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 714.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 711.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 710.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 707.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 704.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 703.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 700.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 699.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 695.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 687.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 681.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 679.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 675.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 671.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 669.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 666.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 665.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 664.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 663.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 662.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 662.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 662.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 661.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 661.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 660.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 660.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 658.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 656.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 654.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 650.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 645.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 645.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 644.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 641.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 640.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 637.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 635.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 635.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 634.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 633.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 631.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 630.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 627.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 627.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 625.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 621.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 619.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 618.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 613.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 605.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 604.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 604.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 603.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 601.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 599.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 595.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 593.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 592.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 592.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 591.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 587.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 584.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 584.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 583.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 582.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 581.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 580.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 577.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 570.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 567.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 567.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 564.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 561.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 559.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 559.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 559.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 558.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 556.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 555.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 554.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 551.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 551.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 545.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 545.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 543.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 540.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 521.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 518.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 517.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 506.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 500.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 485.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 485.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 484.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 484.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 484.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 476.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 473.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 467.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 466.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 466.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 461.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 457.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 457.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 453.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 451.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 451.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 432.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 430.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 429.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 427.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 418.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 417.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 414.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 412.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 409.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 407.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 406.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 406.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 404.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 404.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 403.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 403.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 403.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 371.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 361.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 357.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 340.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 336.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 324.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 313.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 310.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 299.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 289.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 286.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 285.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 280.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 247.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 191.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

696.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 696.9
Samples: 4

Max nTPM: 898.6
Min nTPM: 504.3
Sample A Female 898.6
Sample B Female 744.7
Sample C Male 639.9
Sample D Male 504.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

941.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 941.1
Samples: 4

Max nTPM: 1033.5
Min nTPM: 861.9
Sample A Male 861.9
Sample B Male 982.5
Sample C Female 1033.5
Sample D Female 886.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.6
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 10.7
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 8.5

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