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RPS25
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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:4962.0 nTPM
HPA:2187.8 nTPM
GTEx:4962.0 nTPM
FANTOM5:1612.4 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA031801
Ovarian stroma cells Medium



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2187.8
overview
Female, age 64
Ovary sample 192
nTPM: 1871.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 2452.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 1985.4
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 1803.4
N/A
Female, age 16
Ovary sample 3663
nTPM: 3732.1
N/A
Female, age 20
Ovary sample 3664
nTPM: 2007.9
N/A
Female, age 32
Ovary sample 3665
nTPM: 1461.7

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4962.0
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 4962.0
Samples: 193

Max nTPM: 10853.6
Min nTPM: 1997.9
Std nTPM: 1861.8
Median nTPM: 4469.6
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 10853.6
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 10465.1
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 10274.6
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 10015.8
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 9530.1
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 9437.9
GTEX-183WM-1926-SM-72D5F 70-79 years, female 9343.1
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 9338.1
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 9269.1
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 9227.5
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 9223.0
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 8902.8
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 8888.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 8833.5
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 8648.1
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 8533.3
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 7885.9
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 7859.0
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 7719.6
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 7443.6
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 7356.5
GTEX-QVJO-3126-SM-COH22 60-69 years, female 7319.9
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 7274.3
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 7096.4
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 7074.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 7066.8
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 7037.9
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 6959.0
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 6883.9
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 6779.5
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 6665.6
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 6649.4
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 6640.5
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 6548.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 6432.6
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 6420.9
GTEX-15EOM-1526-SM-68723 20-29 years, female 6410.5
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 6309.4
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 6285.7
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 6283.5
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 6272.5
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 6229.9
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 6134.2
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 6099.7
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 6073.0
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 6030.9
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 5981.9
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 5907.6
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 5807.2
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 5769.9
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 5710.6
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 5692.8
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 5688.3
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 5608.3
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 5606.5
GTEX-R45C-2526-SM-GRR28 60-69 years, female 5550.0
GTEX-13SLX-2426-SM-664OM 50-59 years, female 5540.2
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 5494.3
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 5493.6
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 5489.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 5475.9
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 5461.6
GTEX-RU72-2226-SM-46MUE 50-59 years, female 5419.3
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 5414.4
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 5368.7
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 5288.1
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 5275.4
GTEX-14BIN-1426-SM-664NI 50-59 years, female 5188.7
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 5184.4
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 5149.2
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 5109.0
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 5021.7
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 4991.5
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 4973.3
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 4965.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 4915.7
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 4892.5
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 4865.3
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 4796.7
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 4776.4
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 4766.8
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 4763.6
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 4756.4
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 4756.1
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 4743.3
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 4725.6
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 4723.5
GTEX-14PKV-1226-SM-6871T 20-29 years, female 4722.5
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 4697.1
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 4627.6
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 4590.4
GTEX-S32W-1226-SM-4AD67 50-59 years, female 4579.3
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 4560.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 4548.2
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 4537.6
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 4471.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 4469.6
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 4459.1
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 4443.2
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 4398.6
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 4369.8
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 4358.5
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 4345.0
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 4311.7
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 4305.9
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 4304.7
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 4300.5
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 4300.2
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 4297.3
GTEX-P78B-1926-SM-3P616 40-49 years, female 4289.7
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 4286.2
GTEX-18D9A-0826-SM-718C1 30-39 years, female 4274.4
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 4223.3
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 4222.0
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 4217.6
GTEX-S341-0726-SM-4AD5R 40-49 years, female 4206.4
GTEX-11I78-1926-SM-59878 50-59 years, female 4180.3
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 4125.8
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 4118.1
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 4101.0
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 4092.9
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 4071.2
GTEX-145ME-1226-SM-5MR87 40-49 years, female 4054.2
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 4051.5
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 4044.1
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 4025.7
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 4025.4
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 4019.3
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 4019.0
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 4001.3
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 4000.5
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 3998.5
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 3984.0
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 3970.4
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 3964.5
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 3962.5
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 3956.6
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 3845.9
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 3789.2
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 3743.4
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 3736.2
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 3730.8
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 3729.8
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 3729.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 3720.7
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 3710.2
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 3645.6
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 3604.5
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 3584.1
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 3579.1
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 3573.1
GTEX-QCQG-1426-SM-48U22 50-59 years, female 3561.8
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 3532.9
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 3523.9
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 3517.7
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 3466.1
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 3442.4
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 3434.3
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 3424.1
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 3387.5
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 3384.1
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 3337.4
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 3305.9
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 3268.9
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 3264.7
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 3252.7
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 3247.6
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3245.3
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 3218.4
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 3138.4
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 3094.3
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 3081.0
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 3075.3
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 3057.0
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2971.6
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2863.0
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 2845.7
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2840.8
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2781.8
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2777.6
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2740.3
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2712.2
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2623.6
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2566.9
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 2553.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2539.1
GTEX-14JG6-0626-SM-68716 30-39 years, female 2485.0
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2387.5
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 2142.8
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 2141.2
GTEX-R55G-1526-SM-48FER 40-49 years, female 2076.7
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 2004.0
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1997.9
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OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1612.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 1612.4
FF:10020-101D2 47,75,84 years, female 1612.4

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