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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • NPC2
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:188.9 nTPM
HPA:188.9 nTPM
GTEx:145.9 nTPM
FANTOM5:193.5 Scaled Tags Per Million
Macaque:150.1 nTPM
Pig:40.0 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA000835Antibody CAB032888
Cholangiocytes Not detectedNot detected
Hepatocytes HighMedium





LIVER - PROTEINTALKS DB MS
Median intensity 4583
Sample Intensity
Liver_01
3120
Liver_02
7282
Liver_03
ND
Liver_04
ND
Liver_05
ND
Liver_06
ND
Liver_07
5629
Liver_08
ND
Liver_09
4583
Liver_10
1543

LIVER - MANN MS
Median intensity 45796232
Replicate Intensity
Liver_01
132289662
Liver_02
45796232
Liver_03
37665828

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.9
N/A
Female, age 60
Liver sample 21
nTPM: 176.2
overview
Male, age 54
Liver sample 23
nTPM: 196
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 182.3
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 224
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 238
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 202.5
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 216.8
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 169.9
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 117.9
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 165.1
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.9
GTEx sample id Sample description nTPM
Liver
Average nTPM: 145.9
Samples: 262

Max nTPM: 361.5
Min nTPM: 55.5
Std nTPM: 51.3
Median nTPM: 134.4
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 361.5
GTEX-14PHX-0526-SM-664NW 50-59 years, male 314.0
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 309.2
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 290.0
GTEX-18A66-2026-SM-7189C 60-69 years, male 280.3
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 271.4
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 269.5
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 269.2
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 267.3
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 263.2
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 252.6
GTEX-1B932-1426-SM-793AN 40-49 years, female 248.3
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 245.6
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 243.0
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 242.7
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 242.4
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 233.9
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 232.2
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 229.9
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 229.5
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 223.2
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 222.5
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 221.1
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 217.8
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 217.6
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 214.6
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 213.9
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 213.4
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 213.4
GTEX-Q734-0326-SM-48U15 40-49 years, female 213.0
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 212.6
GTEX-S32W-1926-SM-4AD63 50-59 years, female 211.0
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 210.8
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 207.9
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 207.7
GTEX-O5YV-0726-SM-EV798 60-69 years, female 204.4
GTEX-P78B-1326-SM-3P611 40-49 years, female 204.0
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 202.1
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 200.3
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 198.4
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 197.1
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 196.1
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 196.0
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 192.5
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 191.8
GTEX-14XAO-0226-SM-68728 60-69 years, female 191.8
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 191.5
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 191.0
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 184.9
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 184.7
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 184.1
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 183.2
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 183.1
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 182.4
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 182.3
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 182.0
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 180.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 180.0
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 179.4
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 177.6
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 176.2
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 176.0
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 175.8
GTEX-17HHE-0126-SM-79398 50-59 years, male 175.7
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 175.3
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 175.3
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 174.7
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 174.2
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 173.6
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 170.2
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 169.8
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 169.3
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 168.4
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 167.4
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 166.5
GTEX-13113-1326-SM-5GCOI 60-69 years, female 165.5
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 165.0
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 165.0
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 164.9
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 164.5
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 163.4
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 163.4
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 163.0
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 160.2
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 160.1
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 159.9
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 159.3
GTEX-S33H-1626-SM-4AD68 30-39 years, male 159.2
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 158.8
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 158.3
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 158.0
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 157.7
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 157.0
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 156.0
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 156.0
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 155.2
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 154.8
GTEX-REY6-1226-SM-48FDR 60-69 years, male 154.6
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 154.3
GTEX-QEL4-1226-SM-447A4 50-59 years, male 154.2
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 154.1
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 153.8
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 153.1
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 153.1
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 153.0
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 153.0
GTEX-R53T-0326-SM-48FEC 50-59 years, female 152.3
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 150.8
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 150.0
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 148.4
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 147.7
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 147.4
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 146.1
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 146.0
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 145.3
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 144.6
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 144.3
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 143.7
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 143.6
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 143.4
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 141.3
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 141.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 139.7
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 137.7
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 137.7
GTEX-YECK-1926-SM-4W21H 60-69 years, male 137.1
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 135.7
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 135.4
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 135.2
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 134.6
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 134.5
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 134.3
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 133.5
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 132.7
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 131.8
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 131.6
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 130.9
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 130.9
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 130.9
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 130.5
GTEX-11GSP-0626-SM-5986T 60-69 years, female 130.4
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 130.1
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 129.8
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 129.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 129.6
GTEX-18A7A-1526-SM-72D69 50-59 years, female 129.2
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 129.0
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 128.8
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 127.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 127.5
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 127.3
GTEX-14JG1-1626-SM-664NH 40-49 years, male 126.9
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 126.2
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 126.0
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 124.8
GTEX-14E7W-1526-SM-6871X 70-79 years, male 124.7
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 124.6
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 124.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 123.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 122.7
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 122.3
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 122.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 121.9
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 121.5
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 120.8
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 119.6
GTEX-11ZUS-2526-SM-59872 30-39 years, male 119.1
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 119.0
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 118.5
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 118.3
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 117.8
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 117.7
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 117.3
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 117.1
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 115.5
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 115.0
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 115.0
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 114.4
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 113.0
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 113.0
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 112.7
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 112.7
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 112.7
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 112.5
GTEX-RU72-1426-SM-46MUF 50-59 years, female 112.3
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 112.3
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 110.4
GTEX-X261-1726-SM-4PQYT 50-59 years, male 110.2
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 110.0
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 109.7
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 109.1
GTEX-18465-1626-SM-7LG6N 50-59 years, male 108.9
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 108.9
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 108.1
GTEX-QESD-2026-SM-447BI 20-29 years, male 107.7
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 107.6
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 107.5
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 107.4
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 106.9
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 105.9
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 105.5
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 104.6
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 104.4
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 104.3
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 103.6
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 103.2
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 102.2
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 102.0
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 101.8
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 101.7
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 101.6
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 101.2
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 100.3
GTEX-12696-0826-SM-5EGGE 60-69 years, male 99.8
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 99.8
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 99.4
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 99.1
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 98.7
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 98.1
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 97.7
GTEX-111FC-1226-SM-HAV27 60-69 years, male 97.6
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 97.4
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 97.2
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 97.1
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 96.8
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 95.6
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 95.5
GTEX-13112-1426-SM-5EGH8 50-59 years, male 95.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 95.3
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 95.2
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 94.7
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 94.0
GTEX-1B933-1226-SM-731DW 50-59 years, female 93.9
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 93.3
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 92.6
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 91.6
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 90.0
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 89.7
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 88.6
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 88.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 87.9
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 87.4
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 87.1
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 85.2
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 85.1
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 84.3
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 84.1
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 83.4
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 81.7
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 81.6
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 81.1
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 79.0
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 76.9
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 76.3
GTEX-RN64-1826-SM-48FDV 50-59 years, male 75.9
GTEX-14PJO-1726-SM-68719 60-69 years, male 75.6
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 74.5
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 73.5
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 73.2
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 69.4
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 57.3
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 55.5
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

193.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 193.5
FF:10018-101C9 64,69,70 years, mixed 193.5

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.1
Macaque sample Sample description nTPM
Liver
nTPM: 150.1
Samples: 3

Max nTPM: 192.9
Min nTPM: 126.0
Sample B 192.9
Sample C 131.5
Sample D 126.0

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.0
Pig sample Sample description nTPM
Liver
nTPM: 40.0
Samples: 4

Max nTPM: 70.6
Min nTPM: 24.8
Sample A Female 70.6
Sample B Female 25.9
Sample C Male 24.8
Sample D Male 38.7

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