We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NPC2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • NPC2
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Not detected
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:322.7 nTPM
HPA:300.9 nTPM
GTEx:322.7 nTPM
FANTOM5:273.6 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA000835Antibody CAB032888
Follicle cells Not detected-
Ovarian stroma cells Not detectedNot detected





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

300.9
overview
Female, age 64
Ovary sample 192
nTPM: 272.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 293.3
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 227.4
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 224.5
N/A
Female, age 16
Ovary sample 3663
nTPM: 388.6
N/A
Female, age 20
Ovary sample 3664
nTPM: 276.4
N/A
Female, age 32
Ovary sample 3665
nTPM: 423.3

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

322.7
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 322.7
Samples: 193

Max nTPM: 612.3
Min nTPM: 178.4
Std nTPM: 75.0
Median nTPM: 308.3
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 612.3
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 574.8
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 553.1
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 551.6
GTEX-R45C-2526-SM-GRR28 60-69 years, female 525.5
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 501.1
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 499.2
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 493.0
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 484.3
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 464.3
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 462.3
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 461.4
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 460.7
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 455.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 451.1
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 450.8
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 445.6
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 420.4
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 417.8
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 413.0
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 412.2
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 412.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 411.1
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 409.8
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 408.2
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 405.2
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 404.9
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 403.2
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 396.3
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 393.7
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 392.8
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 391.6
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 386.8
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 386.6
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 381.7
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 381.4
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 379.6
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 379.3
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 377.3
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 375.9
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 374.9
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 365.6
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 361.7
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 359.5
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 358.4
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 358.2
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 356.5
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 354.9
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 352.6
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 352.0
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 351.2
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 350.4
GTEX-QCQG-1426-SM-48U22 50-59 years, female 350.2
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 348.7
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 347.6
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 347.0
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 346.4
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 345.5
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 345.4
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 345.0
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 343.7
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 342.0
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 341.9
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 341.2
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 337.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 337.2
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 336.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 336.0
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 334.3
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 331.7
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 331.2
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 330.1
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 328.4
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 326.2
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 324.3
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 323.7
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 323.4
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 322.6
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 321.3
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 319.4
GTEX-183WM-1926-SM-72D5F 70-79 years, female 318.9
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 317.9
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 316.5
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 315.8
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 315.7
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 315.6
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 314.0
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 313.3
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 312.7
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 312.4
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 312.3
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 312.2
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 311.6
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 310.7
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 310.4
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 310.0
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 308.3
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 307.4
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 306.2
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 306.1
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 305.6
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 304.7
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 304.4
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 304.0
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 302.7
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 302.5
GTEX-14BIN-1426-SM-664NI 50-59 years, female 302.2
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 302.2
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 300.6
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 298.5
GTEX-11I78-1926-SM-59878 50-59 years, female 298.1
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 297.3
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 296.8
GTEX-QVJO-3126-SM-COH22 60-69 years, female 296.1
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 294.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 293.5
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 293.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 290.9
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 290.1
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 288.6
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 287.7
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 287.5
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 287.1
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 285.5
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 285.2
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 284.3
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 284.2
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 283.5
GTEX-P78B-1926-SM-3P616 40-49 years, female 282.5
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 282.1
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 281.3
GTEX-S32W-1226-SM-4AD67 50-59 years, female 281.0
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 279.7
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 278.6
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 278.4
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 278.4
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 278.3
GTEX-145ME-1226-SM-5MR87 40-49 years, female 277.3
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 276.8
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 275.7
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 274.5
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 273.0
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 272.3
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 272.0
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 271.7
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 270.1
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 269.4
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 268.9
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 268.1
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 267.9
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 267.2
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 267.0
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 266.9
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 266.8
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 265.3
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 263.8
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 263.3
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 263.3
GTEX-14PKV-1226-SM-6871T 20-29 years, female 262.5
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 261.4
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 260.5
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 260.3
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 258.3
GTEX-18D9A-0826-SM-718C1 30-39 years, female 256.4
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 256.2
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 256.1
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 254.0
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 252.2
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 251.6
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 248.3
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 248.0
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 247.0
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 246.9
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 246.5
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 245.9
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 244.7
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 244.0
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 241.2
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 238.5
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 233.7
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 232.4
GTEX-Q734-0726-SM-48TZP 40-49 years, female 231.4
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 231.3
GTEX-15EOM-1526-SM-68723 20-29 years, female 229.0
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 228.6
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 227.1
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 222.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 215.0
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 213.7
GTEX-R55G-1526-SM-48FER 40-49 years, female 206.0
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 190.6
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 180.5
GTEX-14JG6-0626-SM-68716 30-39 years, female 178.4
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

273.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 273.6
FF:10020-101D2 47,75,84 years, female 273.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo