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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:257.1 nTPM
HPA Brain:111.0 nTPM
GTEx:257.1 nTPM
Pig:30.6 nTPM
Mouse:42.7 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 108.6
2226 Male, age 75, left hemisphere 135.2
1961 Female, age 42, unknown 82.0
Dorsomedial nucleus
nTPM: 85.4
2041 Female, age 72, unknown 91.2
2017 Female, age 42, unknown 84.9
1989 Male, age 62, unknown 80.2
Lateral hypothalamic area
nTPM: 111.0
2228 Male, age 66, unknown 136.1
1791 Male, age 80, right hemisphere 128.3
2271 Male, age 75, both hemispheres 97.7
2412 Male, age 62, unknown 81.7
Mammillary body
nTPM: 103.1
1923 Female, age 72, unknown 121.3
1948 Female, age 72, unknown 118.6
1945 Male, age 80, right hemisphere 103.9
1834 Female, age 42, unknown 93.2
2413 Male, age 66, unknown 78.2
Paraventricular nucleus
nTPM: 91.4
2700 Male, age 62, unknown 91.4
Preoptic area
nTPM: 94.7
1907 Male, age 80, right hemisphere 115.4
1861 Female, age 42, unknown 89.5
2414 Female, age 72, unknown 79.2
Supraoptic nucleus
nTPM: 94.4
1894 Female, age 72, unknown 105.7
2043 Male, age 62, unknown 91.2
2835 Female, age 72, unknown 86.4
Ventromedial nucleus
nTPM: 96.7
1982 Female, age 72, unknown 106.1
1822 Female, age 42, unknown 87.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

257.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 257.1
Samples: 257

Max nTPM: 655.2
Min nTPM: 119.2
Std nTPM: 74.5
Median nTPM: 248.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 655.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 620.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 611.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 477.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 471.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 452.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 431.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 421.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 416.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 408.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 403.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 397.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 392.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 368.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 358.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 355.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 354.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 353.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 350.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 343.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 343.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 337.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 337.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 334.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 333.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 332.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 331.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 329.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 328.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 327.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 326.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 326.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 324.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 322.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 320.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 319.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 318.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 317.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 316.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 313.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 313.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 309.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 308.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 308.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 308.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 307.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 307.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 307.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 307.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 307.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 306.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 305.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 305.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 303.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 303.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 302.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 302.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 301.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 301.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 298.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 297.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 296.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 296.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 294.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 294.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 294.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 292.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 289.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 288.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 288.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 287.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 286.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 285.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 284.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 282.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 281.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 281.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 281.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 280.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 280.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 280.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 279.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 279.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 278.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 275.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 275.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 275.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 274.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 273.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 273.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 272.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 271.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 271.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 270.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 269.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 268.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 268.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 267.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 266.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 266.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 264.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 264.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 264.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 263.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 263.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 262.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 261.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 260.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 260.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 260.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 260.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 259.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 258.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 258.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 257.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 257.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 256.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 255.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 255.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 254.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 253.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 253.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 252.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 251.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 249.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 249.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 249.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 248.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 248.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 247.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 246.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 246.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 246.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 246.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 246.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 244.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 244.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 243.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 243.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 243.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 242.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 241.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 241.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 241.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 240.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 240.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 240.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 239.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 239.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 239.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 239.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 239.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 237.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 234.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 232.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 231.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 231.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 229.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 228.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 228.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 228.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 227.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 226.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 226.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 225.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 224.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 224.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 224.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 224.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 219.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 219.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 219.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 218.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 217.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 215.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 215.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 215.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 214.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 214.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 212.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 212.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 211.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 211.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 211.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 211.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 211.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 209.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 209.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 208.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 208.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 208.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 207.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 207.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 207.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 206.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 205.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 205.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 205.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 204.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 203.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 203.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 203.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 203.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 202.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 202.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 201.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 201.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 200.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 199.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 199.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 199.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 199.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 198.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 195.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 193.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 192.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 192.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 191.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 190.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 189.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 187.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 187.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 186.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 186.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 185.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 184.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 183.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 182.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 180.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 179.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 179.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 176.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 175.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 174.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 174.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 173.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 172.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 172.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 170.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 165.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 165.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 163.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 160.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 159.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 157.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 156.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 155.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 155.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 153.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 153.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 152.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 149.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 142.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 141.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 134.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 131.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 119.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 30.6
Samples: 4

Max nTPM: 41.6
Min nTPM: 20.0
Sample A Female 41.6
Sample B Female 33.5
Sample C Male 27.3
Sample D Male 20.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 42.8
Samples: 4

Max nTPM: 52.9
Min nTPM: 36.7
Sample A Male 43.2
Sample B Male 52.9
Sample C Female 36.7
Sample D Female 38.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.3
75198184 Antisense, RP_060502_02_B05, Mouse strain C57BL/6J (56 days, male) 0.3

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