RHOQ
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • RHOQ
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:44.7 nTPM
GTEx:40.5 nTPM
FANTOM5:12.9 Scaled Tags Per Million
Macaque:55.8 nTPM
Pig:45.3 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.7
Sample id Sample description nTPM
Putamen
nTPM: 44.7
1829 Male, age 74, unknown 50.4
2647 Male, age 75, left hemisphere 46.2
2482 Female, age 94, left hemisphere 46.1
2489 Female, age 72, unknown 45.4
1838 Male, age 80, right hemisphere 44.8
2466 Female, age 79, unknown 42.3
1937 Female, age 91, right hemisphere 37.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 40.5
Samples: 254

Max nTPM: 59.3
Min nTPM: 15.1
Std nTPM: 6.2
Median nTPM: 40.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 59.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 58.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 55.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 55.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 54.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 52.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 52.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 52.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 52.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 52.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 51.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 51.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 50.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 50.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 50.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 50.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 49.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 49.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 49.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 49.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 49.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 49.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 49.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 49.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 48.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 48.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 48.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 48.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 47.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 47.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 47.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 47.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 47.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 47.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 47.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 47.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 47.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 46.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 46.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 46.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 46.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 46.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 46.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 46.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 45.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 45.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 45.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 45.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 45.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 45.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 45.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 45.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 45.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 45.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 44.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 44.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 44.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 44.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 44.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 44.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 44.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 44.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 44.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 44.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 44.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 43.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 43.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 43.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 43.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 43.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 43.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 43.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 43.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 43.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 43.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 43.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 43.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 43.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 43.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 43.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 43.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 43.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 42.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 42.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 42.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 42.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 42.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 42.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 42.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 42.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 42.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 42.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 42.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 42.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 42.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 42.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 41.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 41.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 41.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 41.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 41.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 41.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 41.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 41.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 41.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 41.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 41.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 41.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 41.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 41.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 41.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 40.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 40.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 40.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 40.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 40.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 40.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 40.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 40.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 40.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 40.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 40.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 40.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 40.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 40.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 39.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 39.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 39.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 39.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 39.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 39.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 39.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 39.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 39.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 39.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 39.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 39.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 39.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 39.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 38.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 38.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 38.8
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 38.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 38.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 38.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 38.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 38.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 38.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 38.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 38.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 38.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 38.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 38.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 38.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 38.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 38.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 38.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 37.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 37.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 37.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 37.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 37.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 37.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 37.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 37.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 37.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 37.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 37.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 37.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 36.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 36.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 36.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 36.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 36.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 36.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 36.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 36.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 36.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 36.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 36.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 36.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 36.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 36.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 36.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 35.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 35.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 35.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 35.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 35.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 35.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 35.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 35.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 35.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 35.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 35.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 35.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 35.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 34.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 34.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 34.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 34.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 34.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 34.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 34.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 34.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 34.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 34.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 34.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 34.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 34.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 34.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 34.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 34.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 34.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 33.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 33.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 33.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 33.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 33.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 33.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 33.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 32.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 32.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 32.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 32.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 32.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 32.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 32.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 31.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 31.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 31.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 31.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 31.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 31.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 30.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 30.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 30.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 30.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 29.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 29.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 29.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 28.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 28.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 28.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 25.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 15.1
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

12.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 12.9
FF:10176-103C5 60 years, female 12.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.8
Macaque sample Sample description nTPM
Putamen
nTPM: 55.9
Samples: 2

Max nTPM: 59.5
Min nTPM: 52.2
Sample A 52.2
Sample B 59.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.3
Pig sample Sample description nTPM
Putamen
nTPM: 45.3
Samples: 3

Max nTPM: 55.1
Min nTPM: 39.3
Sample B Female 41.5
Sample C Male 55.1
Sample D Male 39.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.