HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:69.2 nTPM
HPA Brain:39.9 nTPM
GTEx:69.2 nTPM
FANTOM5:89.9 Scaled Tags Per Million
Pig:99.2 nTPM
Mouse:63.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051798
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 39.9
Sample id Sample description nTPM
Hippocampus
nTPM: 33.2
1898 Male, age 80, left hemisphere 50.7
1855 Male, age 76, left hemisphere 34.0
2621 Female, age 67, right hemisphere 33.7
1911 Female, age 85, right hemisphere 27.1
2529 Female, age 94, left hemisphere 27.1
2148 Female, age 91, left hemisphere 26.8
Dentate gyrus
nTPM: 28.6
1927 Female, age 91, both hemispheres 44.5
2530 Female, age 94, left hemisphere 37.4
2010 Male, age 76, both hemispheres 32.0
2246 Female, age 85, both hemispheres 25.8
2528 Male, age 74, both hemispheres 19.1
2531 Female, age 67, both hemispheres 12.5
Entorhinal gyrus
nTPM: 23.1
2613 Female, age 94, left hemisphere 32.3
2764 Male, age 80, right hemisphere 25.9
1938 Female, age 85, left hemisphere 25.3
2686 Male, age 75, right hemisphere 20.4
1787 Male, age 76, left hemisphere 20.2
2117 Female, age 91, right hemisphere 14.8
Hippocampus, CA1
nTPM: 39.9
2749 Male, age 80, left hemisphere 89.9
2527 Male, age 74, both hemispheres 35.6
1873 Female, age 85, both hemispheres 34.0
2082 Female, age 91, right hemisphere 27.8
2045 Male, age 76, both hemispheres 12.3
Hippocampus, CA2
nTPM: 37.1
1963 Male, age 80, left hemisphere 57.7
1892 Male, age 76, both hemispheres 49.8
2249 Male, age 74, both hemispheres 34.1
1940 Female, age 85, left hemisphere 27.3
2437 Female, age 94, left hemisphere 27.2
2113 Female, age 91, right hemisphere 26.8
Hippocampus, CA3
nTPM: 31.8
2137 Male, age 80, left hemisphere 70.9
1867 Male, age 76, both hemispheres 31.6
2436 Male, age 74, both hemispheres 29.4
2861 Female, age 67, both hemispheres 27.7
1891 Female, age 85, both hemispheres 17.8
2620 Female, age 94, left hemisphere 13.2
Parahippocampal cortex
nTPM: 25.4
2245 Female, age 91, both hemispheres 41.4
1850 Male, age 80, both hemispheres 29.8
1990 Female, age 91, right hemisphere 27.7
2018 Male, age 76, both hemispheres 25.9
2250 Female, age 67, right hemisphere 25.0
1933 Female, age 85, both hemispheres 23.8
2693 Female, age 94, both hemispheres 22.9
2622 Female, age 67, right hemisphere 21.7
2692 Male, age 74, both hemispheres 18.4
2532 Female, age 72, left hemisphere 17.7
Perirhinal gyrus
nTPM: 31.2
1847 Female, age 91, left hemisphere 44.8
2521 Female, age 94, right hemisphere 33.1
1794 Male, age 80, right hemisphere 32.7
1841 Female, age 85, right hemisphere 27.0
2848 Male, age 76, right hemisphere 18.7
Subiculum
nTPM: 25.5
1901 Male, age 80, both hemispheres 38.5
2438 Female, age 94, left hemisphere 27.2
2042 Male, age 76, both hemispheres 26.7
1977 Female, age 85, both hemispheres 24.7
2619 Male, age 74, both hemispheres 20.1
2729 Female, age 91, right hemisphere 15.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 69.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.2
Samples: 255

Max nTPM: 286.3
Min nTPM: 5.3
Std nTPM: 43.9
Median nTPM: 61.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 286.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 231.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 198.9
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 197.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 193.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 174.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 167.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 166.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 165.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 165.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 162.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.9
FF:10169-103B7 60 years, female 133.9
FF:10153-102I9 76 years, female 45.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 99.2
Pig sample Sample description nTPM
Subiculum
nTPM: 42.8
Samples: 4

Max nTPM: 53.1
Min nTPM: 35.2
Sample A Female 53.1
Sample B Female 39.0
Sample C Male 44.0
Sample D Male 35.2
Dorsal hippocampus
nTPM: 99.2
Samples: 4

Max nTPM: 156.0
Min nTPM: 70.2
Sample A Female 156.0
Sample B Female 95.8
Sample C Male 70.2
Sample D Male 74.7
Entorhinal cortex
nTPM: 50.3
Samples: 4

Max nTPM: 55.4
Min nTPM: 40.9
Sample A Female 50.8
Sample B Female 54.2
Sample C Male 55.4
Sample D Male 40.9
Ventral hippocampus
nTPM: 68.9
Samples: 4

Max nTPM: 116.2
Min nTPM: 42.1
Sample A Female 59.4
Sample B Female 42.1
Sample C Male 57.9
Sample D Male 116.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 63.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.5
Samples: 4

Max nTPM: 55.6
Min nTPM: 43.1
Sample A Male 48.9
Sample B Male 55.6
Sample C Female 46.3
Sample D Female 43.1
Hippocampal formation
nTPM: 63.0
Samples: 4

Max nTPM: 74.7
Min nTPM: 51.6
Sample A Male 64.1
Sample B Male 74.7
Sample C Female 61.5
Sample D Female 51.6

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