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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Low
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1231.1
nTPM
HPA Brain:
256.4
nTPM
GTEx:
1231.1
nTPM
FANTOM5:
19.3
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA047252
Glial cells
Low
Neuronal cells
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
256.4
Sample id
Sample description
nTPM
Hippocampus nTPM: 256.4
2529
Female, age 94, left hemisphere
342.0
2621
Female, age 67, right hemisphere
278.8
1898
Male, age 80, left hemisphere
246.6
1911
Female, age 85, right hemisphere
235.0
2148
Female, age 91, left hemisphere
219.1
1855
Male, age 76, left hemisphere
216.7
Dentate gyrus nTPM: 253.9
2530
Female, age 94, left hemisphere
367.9
2010
Male, age 76, both hemispheres
282.5
2246
Female, age 85, both hemispheres
270.6
2531
Female, age 67, both hemispheres
233.9
2528
Male, age 74, both hemispheres
198.6
1927
Female, age 91, both hemispheres
170.0
Entorhinal gyrus nTPM: 238.8
2686
Male, age 75, right hemisphere
332.4
2117
Female, age 91, right hemisphere
250.4
1787
Male, age 76, left hemisphere
244.3
2764
Male, age 80, right hemisphere
219.8
1938
Female, age 85, left hemisphere
196.3
2613
Female, age 94, left hemisphere
189.9
Hippocampus, CA1 nTPM: 229.1
2527
Male, age 74, both hemispheres
253.6
2749
Male, age 80, left hemisphere
242.5
2045
Male, age 76, both hemispheres
239.6
1873
Female, age 85, both hemispheres
214.0
2082
Female, age 91, right hemisphere
195.7
Hippocampus, CA2 nTPM: 227.8
1963
Male, age 80, left hemisphere
247.0
2437
Female, age 94, left hemisphere
246.5
1892
Male, age 76, both hemispheres
246.3
2113
Female, age 91, right hemisphere
224.0
2249
Male, age 74, both hemispheres
216.6
1940
Female, age 85, left hemisphere
186.1
Hippocampus, CA3 nTPM: 220.8
1867
Male, age 76, both hemispheres
259.8
1891
Female, age 85, both hemispheres
257.9
2137
Male, age 80, left hemisphere
237.2
2861
Female, age 67, both hemispheres
232.5
2436
Male, age 74, both hemispheres
170.9
2620
Female, age 94, left hemisphere
166.3
Parahippocampal cortex nTPM: 226.6
2018
Male, age 76, both hemispheres
304.3
2245
Female, age 91, both hemispheres
279.6
2692
Male, age 74, both hemispheres
244.4
1990
Female, age 91, right hemisphere
230.7
2532
Female, age 72, left hemisphere
230.2
2250
Female, age 67, right hemisphere
226.1
1850
Male, age 80, both hemispheres
211.3
2622
Female, age 67, right hemisphere
192.0
1933
Female, age 85, both hemispheres
178.3
2693
Female, age 94, both hemispheres
169.1
Perirhinal gyrus nTPM: 213.0
2848
Male, age 76, right hemisphere
283.4
1841
Female, age 85, right hemisphere
216.4
1794
Male, age 80, right hemisphere
194.0
2521
Female, age 94, right hemisphere
189.7
1847
Female, age 91, left hemisphere
181.7
Subiculum nTPM: 252.3
2438
Female, age 94, left hemisphere
320.4
2042
Male, age 76, both hemispheres
290.7
1977
Female, age 85, both hemispheres
270.1
1901
Male, age 80, both hemispheres
226.0
2619
Male, age 74, both hemispheres
204.7
2729
Female, age 91, right hemisphere
202.0
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1231.1
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 1231.1
Samples: 197
Max nTPM: 3403.6
Min nTPM: 508.0
Std nTPM: 502.8
Median nTPM: 1107.4
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
3403.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
3026.1
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
2740.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
2718.6
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
2504.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
2471.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
2452.2
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
2412.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
2362.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
2355.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
2298.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
2255.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
2133.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2076.0
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
2051.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
2043.0
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
2012.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1997.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
1960.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
1887.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
1881.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1865.8
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1851.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
1822.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
1819.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1817.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1750.2
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
1747.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
1692.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
1684.1
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
1681.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
1647.6
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
1636.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
1609.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
1598.9
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
1595.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1586.6
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
1584.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1580.3
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
1570.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
1564.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1557.4
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
1546.2
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
1544.9
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
1529.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
1519.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
1497.4
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
1485.5
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
1482.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1480.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
1477.6
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
1462.3
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
1454.1
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
1447.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1434.3
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
1406.2
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
1396.0
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
1390.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1372.9
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
1349.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
1340.5
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
1332.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1329.2
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
1319.3
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
1300.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
1299.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
1296.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
1296.7
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
1277.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1274.0
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
1270.8
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
1270.7
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
1262.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
1261.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
1250.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1243.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
1242.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
1240.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1227.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
1208.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
1199.2
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
1190.0
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
1189.5
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
1185.3
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
1174.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
1174.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
1170.7
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
1165.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
1155.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
1153.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1152.1
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
1151.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
1138.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1130.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
1126.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
1124.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
1122.7
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
1119.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
1107.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
1103.1
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
1099.2
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
1098.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
1086.4
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
1079.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
1068.0
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
1065.6
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
1059.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
1054.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
1051.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
1050.4
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
1049.1
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
1041.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
1038.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1035.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
1034.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
1031.9
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
1028.7
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
1027.3
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
1017.8
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
1008.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
1005.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
1005.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
1003.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
1003.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
989.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
982.8
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
975.6
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
973.4
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
967.0
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
964.1
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
955.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
953.9
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
947.4
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
933.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
928.5
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
917.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
916.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
914.4
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
909.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
902.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
902.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
901.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
901.2
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
889.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
888.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
879.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
869.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
864.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
859.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
859.3
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
851.7
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
850.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
849.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
847.2
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
846.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
842.5
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
827.9
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
814.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
811.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
805.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
799.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
797.0
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
792.8
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
789.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
787.6
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
785.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
780.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
778.5
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
775.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
772.7
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
765.8
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
756.1
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
747.0
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
741.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
739.6
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
729.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
729.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
727.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
725.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
716.7
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
698.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
683.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
679.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
675.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
671.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
669.7
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
665.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
665.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
663.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
654.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
628.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
627.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
617.6
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
594.6
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
565.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
508.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
508.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.