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BETA
  • SUMMARY

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  • RPL21
EVOLUTIONARY MEDULLA OBLONGATA Show tissue menu
BRAIN55 EYE3 ENDOCRINE TISSUES4 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM6 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CLAUSTRUM CUNEUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI
MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREOPTIC AREA
PUTAMEN SEPTUM SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS THALAMUS VENTRAL SPINAL CORD WHITE MATTER
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:399.9 nTPM
FANTOM5:24.1 Scaled Tags Per Million
Macaque:201.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

399.9
Sample id Sample description nTPM
Area postrema
nTPM: 371.9
2799 Male, age 61, both hemispheres 483.2
2306 Male, age 80, both hemispheres 413.1
2054 Male, age 76, both hemispheres 219.6
Dorsal medullary reticular nucleus
nTPM: 259.4
2373 Male, age 61, both hemispheres 289.9
2040 Female, age 85, both hemispheres 250.9
2088 Male, age 76, both hemispheres 237.3
Dorsal motor vagal complex
nTPM: 356.2
2797 Male, age 61, both hemispheres 560.4
2807 Female, age 85, both hemispheres 431.6
2643 Male, age 74, both hemispheres 391.9
2813 Female, age 72, unknown 356.5
2133 Female, age 91, both hemispheres 292.4
2844 Male, age 55, unknown 292.1
2185 Male, age 76, both hemispheres 283.5
2000 Male, age 74, unknown 241.5
Gigantocellular reticular nuclei, medullary
nTPM: 294.6
2314 Male, age 61, both hemispheres 407.2
2387 Female, age 91, both hemispheres 345.0
2022 Male, age 76, right hemisphere 270.1
2310 Male, age 80, both hemispheres 269.0
1876 Female, age 85, both hemispheres 259.9
2462 Male, age 74, both hemispheres 216.3
Gigantocellular reticular nuclei, pars
nTPM: 271.3
2706 Male, age 80, both hemispheres 301.8
2084 Female, age 85, both hemispheres 293.2
2336 Male, age 61, both hemispheres 273.5
2330 Male, age 80, both hemispheres 262.1
2168 Male, age 76, both hemispheres 226.0
Inferior olive
nTPM: 350.5
2628 Female, age 91, both hemispheres 378.0
2379 Male, age 80, both hemispheres 367.8
2178 Male, age 61, both hemispheres 347.8
2085 Female, age 85, both hemispheres 335.2
2563 Male, age 74, both hemispheres 323.7
Lateral medullary reticular nucleus
nTPM: 353.8
2804 Female, age 91, both hemispheres 449.2
2190 Female, age 85, both hemispheres 415.2
2852 Male, age 80, both hemispheres 380.3
2374 Male, age 61, both hemispheres 362.8
2305 Male, age 74, both hemispheres 275.8
2044 Male, age 76, both hemispheres 239.7
Medial olivary nucleus
nTPM: 399.9
2851 Male, age 80, both hemispheres 468.3
1962 Male, age 76, both hemispheres 411.3
2138 Female, age 91, both hemispheres 389.2
1943 Male, age 61, both hemispheres 330.6
Medial vestibular nucleus
nTPM: 308.5
2803 Female, age 91, both hemispheres 432.8
2801 Male, age 74, both hemispheres 321.1
2624 Male, age 61, both hemispheres 315.7
2093 Male, age 80, both hemispheres 279.2
2743 Female, age 85, both hemispheres 271.3
2134 Male, age 76, both hemispheres 231.0
Motor hypoglossal nucleus
nTPM: 299.1
2132 Female, age 85, both hemispheres 351.7
2182 Male, age 80, both hemispheres 340.5
2125 Female, age 91, both hemispheres 303.5
2461 Male, age 61, both hemispheres 287.4
2277 Male, age 76, both hemispheres 212.5
Nucleus ambiguus
nTPM: 268.0
2071 Male, age 76, both hemispheres 341.3
2096 Female, age 85, both hemispheres 194.7
Nucleus cuneatus
nTPM: 318.1
2808 Female, age 85, both hemispheres 469.5
2805 Female, age 91, both hemispheres 413.1
2380 Male, age 80, both hemispheres 374.6
2381 Male, age 80, both hemispheres 357.8
2376 Male, age 61, both hemispheres 301.8
2562 Male, age 61, both hemispheres 282.4
2564 Male, age 74, both hemispheres 272.1
2100 Male, age 76, both hemispheres 203.1
2131 Male, age 76, both hemispheres 188.9
Nucleus gracilis
nTPM: 382.0
2382 Male, age 80, both hemispheres 442.8
2299 Female, age 85, both hemispheres 360.0
2627 Male, age 74, both hemispheres 343.2
Nucleus raphe obscurus
nTPM: 393.7
2845 Female, age 85, midline 469.0
2800 Male, age 61, midline 368.1
2142 Male, age 76, midline 344.1
Nucleus raphe pallidus
nTPM: 332.2
2145 Male, age 76, midline 350.8
2183 Male, age 80, midline 333.0
1924 Male, age 61, midline 312.9
Nucleus tractus solitarii
nTPM: 280.0
2144 Female, age 91, right hemisphere 333.1
2191 Female, age 85, both hemispheres 324.7
2307 Male, age 80, both hemispheres 233.1
2656 Male, age 76, both hemispheres 229.1
Parvicellular reticular nuclei
nTPM: 264.3
2095 Male, age 76, both hemispheres 300.1
2119 Male, age 80, both hemispheres 287.2
2558 Male, age 74, both hemispheres 205.4
Parvicellular reticular nuclei, medullary
nTPM: 298.9
2189 Female, age 91, both hemispheres 313.9
2181 Male, age 80, left hemisphere 301.3
2091 Female, age 85, both hemispheres 281.5
Peritrigeminal nucleus
nTPM: 310.7
2067 Female, age 85, both hemispheres 356.4
2136 Male, age 76, both hemispheres 312.0
2179 Male, age 61, both hemispheres 263.6
Prepositus hypoglossal nucleus
nTPM: 359.6
2855 Female, age 85, right hemisphere 425.1
2086 Male, age 80, both hemispheres 294.1
Spinal trigeminal nucleus, caudal
nTPM: 299.6
2390 Female, age 91, both hemispheres 330.7
2642 Male, age 74, both hemispheres 319.9
2312 Male, age 61, both hemispheres 312.3
2308 Male, age 80, both hemispheres 308.0
2447 Male, age 76, both hemispheres 227.1
Spinal trigeminal nucleus, interpolar
nTPM: 287.5
2389 Female, age 91, both hemispheres 341.8
2386 Female, age 85, both hemispheres 299.3
2033 Male, age 80, both hemispheres 267.1
2625 Male, age 61, both hemispheres 264.9
2066 Male, age 76, right hemisphere 264.2
Spinal vestibular nucleus
nTPM: 362.2
2806 Female, age 85, both hemispheres 426.0
2796 Male, age 61, both hemispheres 390.1
2384 Male, age 74, both hemispheres 386.7
2780 Male, age 80, both hemispheres 328.5
2748 Male, age 76, both hemispheres 321.4
2186 Female, age 91, both hemispheres 320.6
Superior vestibular nucleus
nTPM: 304.0
2383 Male, age 74, both hemispheres 347.5
2015 Male, age 80, both hemispheres 312.0
2061 Male, age 76, both hemispheres 252.6
Ventral medullary reticular nucleus
nTPM: 306.0
2372 Male, age 61, both hemispheres 350.4
2060 Male, age 76, both hemispheres 261.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 332.3
2302 Female, age 91, both hemispheres 360.3
2118 Male, age 80, both hemispheres 355.0
2741 Female, age 85, both hemispheres 333.2
2180 Male, age 61, both hemispheres 319.2
1986 Male, age 76, both hemispheres 293.9

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

24.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 24.1
FF:10174-103C3 60 years, female 28.7
FF:10038-101F2 18-64 years, mixed 24.2
FF:10155-103A2 76 years, female 19.6

MEDULLA OBLONGATA - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.7
Macaque sample Sample description nTPM
Medulla oblongata
nTPM: 201.7
Samples: 1

Max nTPM: 201.7
Min nTPM: 201.7
Sample A 201.7

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