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BETA
  • SUMMARY

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  • RAMP3
EVOLUTIONARY VAGINA Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Breast & female reproductive system
Evolutionary methods
VAGINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:29.7 nTPM
GTEx:29.7 nTPM
FANTOM5:45.2 Scaled Tags Per Million
Macaque:23.0 nTPM
Mouse:7.0 nTPM
Rat:1.7 nTPM

VAGINA - Annotated protein expression
Pending normal tissue analysis

VAGINA - PROTEINTALKS DB MS
Median intensity ND
Sample Intensity
Vagina_01
ND

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 29.7
Samples: 170

Max nTPM: 125.1
Min nTPM: 3.9
Std nTPM: 20.8
Median nTPM: 24.4
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 125.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 110.0
GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 94.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 89.0
GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 88.5
GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 82.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 82.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 77.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 75.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 73.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 66.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 63.8
GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 63.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 63.0
GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 60.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 60.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 59.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 58.5
GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 52.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 52.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 48.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 48.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 47.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 47.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 47.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 46.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 44.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 44.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 44.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 44.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 44.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 43.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 43.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 42.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 41.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 41.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 40.8
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 40.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 40.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 40.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 40.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 39.8
GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 39.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 37.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 37.2
GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 36.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 35.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 34.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 34.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 34.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 34.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 34.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 33.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 33.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 32.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 31.9
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 31.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 31.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 30.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 30.5
GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 30.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 30.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 30.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 29.7
GTEX-QCQG-1226-SM-48U23 50-59 years, female 29.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 29.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 29.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 28.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 28.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 28.1
GTEX-147F3-1526-SM-5MR7L 50-59 years, female 28.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 28.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 27.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 27.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 27.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 27.0
GTEX-14A5I-2726-SM-5MR84 50-59 years, female 26.0
GTEX-S4UY-1026-SM-4AD53 40-49 years, female 25.4
GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 25.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 25.2
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 24.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 24.9
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 24.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 24.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 24.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 24.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 24.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 24.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 24.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 23.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 23.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 23.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 23.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 22.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 22.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 22.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 22.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 21.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 21.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 21.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 21.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 20.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 20.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 20.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 20.2
GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 20.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 19.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 19.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 19.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 19.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 19.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 19.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 19.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 18.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 18.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 18.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 17.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 17.3
GTEX-RNOR-2526-SM-F21KT 50-59 years, female 17.2
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 16.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 16.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 16.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 16.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 16.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 16.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 15.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 15.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 15.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 15.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 14.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 14.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 14.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 14.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 14.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 14.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 14.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 13.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 13.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 13.5
GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 13.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 12.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 12.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 12.0
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 11.5
GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 11.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 11.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 10.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 10.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 10.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 10.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 9.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 9.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 9.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 9.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 9.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 9.2
GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 9.1
GTEX-132AR-1626-SM-5EGHP 50-59 years, female 8.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 8.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 7.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 7.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 7.1
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 6.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 6.9
GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 6.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 6.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 6.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 5.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 5.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 3.9
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

45.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 45.2
FF:10204-103F6 68 years, female 45.2

VAGINA - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.0
Macaque sample Sample description nTPM
Vagina
nTPM: 23.0
Samples: 1

Max nTPM: 23.0
Min nTPM: 23.0
Sample A 23.0

VAGINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.0
Mouse sample Sample description nTPM
Vagina
nTPM: 7.0
Samples: 2

Max nTPM: 11.8
Min nTPM: 2.2
Sample A 11.8
Sample B 2.2

VAGINA - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.7
Rat sample Sample description nTPM
Vagina
nTPM: 1.7
Samples: 2

Max nTPM: 1.7
Min nTPM: 1.7
Sample A 1.7
Sample A 1.7

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