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  • SUMMARY

  • TISSUE

  • BRAIN

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  • PLP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1639.7 nTPM
HPA Brain:4093.0 nTPM
GTEx:1639.7 nTPM
Pig:2229.2 nTPM
Mouse:2143.8 nTPM
Allen mouse:18.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4093.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 455.8
2226 Male, age 75, left hemisphere 681.5
1961 Female, age 42, unknown 230.1
Dorsomedial nucleus
nTPM: 1310.5
2017 Female, age 42, unknown 2272.9
1989 Male, age 62, unknown 1310.1
2041 Female, age 72, unknown 348.5
Lateral hypothalamic area
nTPM: 2255.5
2271 Male, age 75, both hemispheres 3287.0
2228 Male, age 66, unknown 2679.2
1791 Male, age 80, right hemisphere 1799.0
2412 Male, age 62, unknown 1256.8
Mammillary body
nTPM: 4093.0
1948 Female, age 72, unknown 4659.9
1945 Male, age 80, right hemisphere 4656.3
1834 Female, age 42, unknown 4368.3
1923 Female, age 72, unknown 3877.8
2413 Male, age 66, unknown 2902.8
Paraventricular nucleus
nTPM: 2876.8
2700 Male, age 62, unknown 2876.8
Preoptic area
nTPM: 2195.8
2414 Female, age 72, unknown 3932.3
1861 Female, age 42, unknown 2125.1
1907 Male, age 80, right hemisphere 529.9
Supraoptic nucleus
nTPM: 2809.5
2043 Male, age 62, unknown 3790.9
1894 Female, age 72, unknown 3035.5
2835 Female, age 72, unknown 1602.0
Ventromedial nucleus
nTPM: 305.6
1982 Female, age 72, unknown 341.9
1822 Female, age 42, unknown 269.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1639.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1639.7
Samples: 257

Max nTPM: 10014.5
Min nTPM: 42.2
Std nTPM: 1663.4
Median nTPM: 1040.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 10014.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 8402.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 8131.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 7672.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 7027.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 6414.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 6194.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 6033.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 5916.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 5726.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 5605.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 5342.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 5251.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 5003.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 4819.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 4585.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 4564.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 4484.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 4452.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 4424.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 4419.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 4395.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 4393.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 4187.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 4103.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 4077.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 3941.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 3920.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 3870.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 3812.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 3783.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 3697.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 3552.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 3395.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 3381.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 3365.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 3293.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 3238.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 3121.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 2888.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 2880.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 2870.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 2857.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 2822.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 2732.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 2730.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 2695.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 2622.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 2606.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 2593.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2540.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 2526.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 2523.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 2517.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 2495.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 2461.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 2414.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 2389.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 2327.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 2321.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 2297.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2283.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 2281.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 2207.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 2160.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 2157.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 2131.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 2103.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 2061.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 1952.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1927.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1882.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1879.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1865.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1858.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1841.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1826.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1811.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1789.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1775.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 1773.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 1727.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1721.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1698.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1665.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1622.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1586.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1543.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1540.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1534.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1527.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1523.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1518.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1512.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1510.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1505.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1499.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 1497.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 1493.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 1461.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 1424.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1411.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 1385.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1368.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1349.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 1331.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1303.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1276.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1275.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1272.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1248.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 1243.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 1239.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1204.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 1197.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1195.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1157.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 1155.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1150.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 1144.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 1137.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1130.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1129.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1095.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 1069.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 1066.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 1063.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1050.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1040.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 1039.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 1036.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 1016.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 999.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 998.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 996.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 987.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 962.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 959.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 958.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 902.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 895.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 884.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 862.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 856.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 848.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 837.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 827.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 796.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 776.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 775.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 766.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 732.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 731.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 725.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 713.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 704.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 698.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 697.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 697.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 696.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 689.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 686.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 684.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 676.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 674.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 664.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 656.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 649.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 648.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 641.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 630.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 623.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 614.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 610.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 610.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 606.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 604.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 597.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 587.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 569.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 563.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 551.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 551.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 551.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 541.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 539.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 539.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 538.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 534.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 528.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 522.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 517.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 515.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 509.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 506.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 504.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 501.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 499.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 492.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 487.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 485.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 478.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 474.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 472.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 472.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 467.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 467.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 459.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 455.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 426.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 426.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 424.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 418.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 414.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 406.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 405.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 404.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 399.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 393.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 386.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 381.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 374.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 365.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 356.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 351.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 347.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 344.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 331.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 330.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 329.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 323.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 319.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 296.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 294.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 293.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 292.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 284.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 282.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 281.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 273.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 268.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 257.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 253.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 249.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 246.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 235.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 234.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 224.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 209.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 187.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 146.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 142.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 135.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 108.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 82.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 82.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 42.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2229.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 2229.2
Samples: 4

Max nTPM: 3000.7
Min nTPM: 953.9
Sample A Female 2515.3
Sample B Female 3000.7
Sample C Male 2447.0
Sample D Male 953.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2143.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 2143.8
Samples: 4

Max nTPM: 2683.5
Min nTPM: 1505.8
Sample A Male 1505.8
Sample B Male 1768.0
Sample C Female 2683.5
Sample D Female 2618.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.8
75457515 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 20.8
75496147 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 20.2
75457512 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 20.0
75496148 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 19.7
69117382 Antisense, RP_050330_01_A05, Mouse strain C57BL/6J (56 days, male) 19.5
75457514 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 19.5
75496510 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 19.5
75492715 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 19.2
75496499 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 19.2
75492714 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 18.9
79556704 Antisense, RP_071204_01_D07, Mouse strain C57BL/6J (56 days, male) 18.9
75496529 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 18.8
75457513 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 18.3
75492744 Antisense, RP_060523_03_H05, Mouse strain C57BL/6J (56 days, male) 18.0
75496146 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 18.0
75496145 Antisense, RP_060523_03_E05, Mouse strain C57BL/6J (56 days, male) 17.9
75496500 Antisense, RP_060523_03_F05, Mouse strain C57BL/6J (56 days, male) 16.8
75492725 Antisense, RP_060523_03_G05, Mouse strain C57BL/6J (56 days, male) 16.0
2490 Antisense, RP_Baylor_102969, Mouse strain C57BL/6J (56 days, male) 12.7

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