HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:11.8 nTPM
HPA Brain:130.3 nTPM
GTEx:11.8 nTPM
FANTOM5:77.2 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:9.1 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019819
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 130.3
Sample id Sample description nTPM
Hippocampus
nTPM: 114.5
2529 Female, age 94, left hemisphere 142.2
1911 Female, age 85, right hemisphere 124.7
2621 Female, age 67, right hemisphere 119.6
2148 Female, age 91, left hemisphere 109.5
1855 Male, age 76, left hemisphere 99.0
1898 Male, age 80, left hemisphere 92.0
Dentate gyrus
nTPM: 104.8
2530 Female, age 94, left hemisphere 123.9
2246 Female, age 85, both hemispheres 114.3
2010 Male, age 76, both hemispheres 112.8
2531 Female, age 67, both hemispheres 102.2
2528 Male, age 74, both hemispheres 92.5
1927 Female, age 91, both hemispheres 82.9
Entorhinal gyrus
nTPM: 114.1
2686 Male, age 75, right hemisphere 141.6
2117 Female, age 91, right hemisphere 134.5
1938 Female, age 85, left hemisphere 112.0
2613 Female, age 94, left hemisphere 106.1
1787 Male, age 76, left hemisphere 96.5
2764 Male, age 80, right hemisphere 93.6
Hippocampus, CA1
nTPM: 103.4
2527 Male, age 74, both hemispheres 120.6
2082 Female, age 91, right hemisphere 111.3
1873 Female, age 85, both hemispheres 103.9
2045 Male, age 76, both hemispheres 91.7
2749 Male, age 80, left hemisphere 89.7
Hippocampus, CA2
nTPM: 105.0
2113 Female, age 91, right hemisphere 121.7
1940 Female, age 85, left hemisphere 115.6
1963 Male, age 80, left hemisphere 111.4
2437 Female, age 94, left hemisphere 104.5
2249 Male, age 74, both hemispheres 101.9
1892 Male, age 76, both hemispheres 74.6
Hippocampus, CA3
nTPM: 98.0
1891 Female, age 85, both hemispheres 119.8
2861 Female, age 67, both hemispheres 106.6
2137 Male, age 80, left hemisphere 104.8
2436 Male, age 74, both hemispheres 95.5
1867 Male, age 76, both hemispheres 82.9
2620 Female, age 94, left hemisphere 78.3
Parahippocampal cortex
nTPM: 109.5
2692 Male, age 74, both hemispheres 145.5
2622 Female, age 67, right hemisphere 120.9
2532 Female, age 72, left hemisphere 119.7
2245 Female, age 91, both hemispheres 112.8
1990 Female, age 91, right hemisphere 108.1
1850 Male, age 80, both hemispheres 105.5
2018 Male, age 76, both hemispheres 99.4
1933 Female, age 85, both hemispheres 97.4
2693 Female, age 94, both hemispheres 97.3
2250 Female, age 67, right hemisphere 88.6
Perirhinal gyrus
nTPM: 96.2
2521 Female, age 94, right hemisphere 114.3
1841 Female, age 85, right hemisphere 93.3
1847 Female, age 91, left hemisphere 93.0
1794 Male, age 80, right hemisphere 92.2
2848 Male, age 76, right hemisphere 88.3
Subiculum
nTPM: 130.3
2438 Female, age 94, left hemisphere 153.7
2042 Male, age 76, both hemispheres 136.8
2619 Male, age 74, both hemispheres 131.3
1901 Male, age 80, both hemispheres 131.1
2729 Female, age 91, right hemisphere 117.9
1977 Female, age 85, both hemispheres 111.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 255

Max nTPM: 28.8
Min nTPM: 4.2
Std nTPM: 4.6
Median nTPM: 10.9
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 28.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 27.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 23.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 23.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 23.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 23.0
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 22.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 22.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 22.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 77.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.2
FF:10153-102I9 76 years, female 102.5
FF:10169-103B7 60 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.1
Pig sample Sample description nTPM
Subiculum
nTPM: 23.2
Samples: 4

Max nTPM: 25.6
Min nTPM: 20.6
Sample A Female 20.6
Sample B Female 25.6
Sample C Male 22.1
Sample D Male 24.3
Dorsal hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 27.1
Min nTPM: 19.5
Sample A Female 19.7
Sample B Female 20.9
Sample C Male 27.1
Sample D Male 19.5
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 20.5
Min nTPM: 18.5
Sample A Female 19.3
Sample B Female 18.5
Sample C Male 18.9
Sample D Male 20.5
Ventral hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 24.8
Min nTPM: 15.6
Sample A Female 24.5
Sample B Female 24.8
Sample C Male 15.6
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.1
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.7
Sample A Male 10.6
Sample B Male 9.1
Sample C Female 7.7
Sample D Female 9.0
Hippocampal formation
nTPM: 7.0
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.2
Sample A Male 6.2
Sample B Male 8.8
Sample C Female 6.6
Sample D Female 6.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68845615 Antisense, RP_050224_02_B07, Mouse strain C57BL/6J (56 days, male) 0.1

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