We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CDKN1A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CDKN1A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:37.8 nTPM
HPA Brain:31.2 nTPM
GTEx:37.8 nTPM
Pig:8.8 nTPM
Mouse:8.2 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 23.3
2226 Male, age 75, left hemisphere 24.2
1961 Female, age 42, unknown 22.4
Dorsomedial nucleus
nTPM: 23.2
2041 Female, age 72, unknown 29.6
1989 Male, age 62, unknown 22.0
2017 Female, age 42, unknown 18.1
Lateral hypothalamic area
nTPM: 30.5
2412 Male, age 62, unknown 35.5
1791 Male, age 80, right hemisphere 33.8
2271 Male, age 75, both hemispheres 30.3
2228 Male, age 66, unknown 22.3
Mammillary body
nTPM: 24.9
2413 Male, age 66, unknown 30.6
1923 Female, age 72, unknown 26.7
1948 Female, age 72, unknown 24.4
1945 Male, age 80, right hemisphere 21.6
1834 Female, age 42, unknown 21.1
Paraventricular nucleus
nTPM: 19.9
2700 Male, age 62, unknown 19.9
Preoptic area
nTPM: 23.9
1861 Female, age 42, unknown 26.6
1907 Male, age 80, right hemisphere 25.6
2414 Female, age 72, unknown 19.6
Supraoptic nucleus
nTPM: 31.2
2043 Male, age 62, unknown 34.5
2835 Female, age 72, unknown 29.6
1894 Female, age 72, unknown 29.4
Ventromedial nucleus
nTPM: 26.2
1822 Female, age 42, unknown 33.0
1982 Female, age 72, unknown 19.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 37.8
Samples: 257

Max nTPM: 325.6
Min nTPM: 2.9
Std nTPM: 49.9
Median nTPM: 19.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 325.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 319.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 263.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 247.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 237.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 215.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 214.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 170.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 159.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 156.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 151.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 151.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 149.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 137.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 131.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 124.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 113.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 113.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 112.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 110.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 107.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 105.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 104.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 99.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 98.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 93.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 87.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 86.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 83.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 79.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 79.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 79.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 77.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 65.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 65.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 64.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 61.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 60.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 58.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 58.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 56.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 55.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 55.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 54.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 54.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 52.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 52.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 51.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 50.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 50.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 50.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 50.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 49.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 49.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 48.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 47.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 44.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 44.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 43.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 43.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 42.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 42.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 41.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 40.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 40.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 39.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 39.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 39.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 39.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 39.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 38.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 38.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 38.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 38.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 38.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 37.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 37.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 36.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 36.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 36.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 35.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 35.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 35.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 35.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 35.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 33.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 33.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 33.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 33.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 33.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 32.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 31.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 31.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 31.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 31.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 31.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 31.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 30.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 30.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 29.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 28.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 26.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 26.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 25.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 25.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 25.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 24.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 24.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 24.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 23.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 23.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 23.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 23.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 23.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 22.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 22.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 22.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 22.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 22.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 21.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 21.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 21.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 20.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 20.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 20.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 20.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 20.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 19.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 19.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 19.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 19.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 19.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 18.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 18.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 18.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 18.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 18.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 18.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 17.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 17.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 17.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 17.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 17.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 16.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 16.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 16.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 16.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 16.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 16.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 16.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 15.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 15.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 15.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 15.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 15.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 15.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 15.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 15.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 15.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 15.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 15.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 14.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 14.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 14.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 14.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 14.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 14.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 14.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 13.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 13.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 13.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 13.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 13.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 13.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 13.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 12.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 12.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 12.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 12.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 12.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 12.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 12.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 11.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 11.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 11.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 11.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 10.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 10.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 10.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 10.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 10.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 10.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 10.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 9.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 9.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 9.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 9.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 9.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 9.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 9.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 9.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 9.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 9.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 9.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 9.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 9.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 9.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 9.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 8.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 8.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 8.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 8.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 8.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 8.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 8.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 8.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 8.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 8.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 8.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 8.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 7.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 7.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 7.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 7.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 6.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 6.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 6.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 6.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 6.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 6.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 6.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 6.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 6.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 5.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 5.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 5.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 5.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 5.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 5.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 5.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 5.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 5.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 5.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 5.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 5.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 4.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 4.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 4.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 4.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 4.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 4.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 4.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 3.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 3.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 3.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 3.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 2.9
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 8.8
Samples: 4

Max nTPM: 11.5
Min nTPM: 4.2
Sample A Female 4.2
Sample B Female 11.2
Sample C Male 11.5
Sample D Male 8.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 8.2
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.2
Sample A Male 6.4
Sample B Male 6.2
Sample C Female 10.5
Sample D Female 9.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.6
2086 Antisense, RP_Baylor_253890, Mouse strain C57BL/6J (56 days, male) 0.9
2085 Antisense, RP_Baylor_253890, Mouse strain C57BL/6J (56 days, male) 0.4
80343383 Antisense, RP_071204_04_G04, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo