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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
476.8
nTPM
HPA Brain:
495.1
nTPM
GTEx:
476.8
nTPM
FANTOM5:
2028.3
Scaled Tags Per Million
Pig:
0.4
nTPM
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
495.1
Sample id
Sample description
nTPM
Hippocampus nTPM: 456.9
2529
Female, age 94, left hemisphere
643.8
1855
Male, age 76, left hemisphere
448.6
2148
Female, age 91, left hemisphere
432.2
1911
Female, age 85, right hemisphere
424.7
2621
Female, age 67, right hemisphere
424.2
1898
Male, age 80, left hemisphere
368.0
Dentate gyrus nTPM: 406.5
2528
Male, age 74, both hemispheres
546.8
2246
Female, age 85, both hemispheres
456.3
2010
Male, age 76, both hemispheres
435.4
2530
Female, age 94, left hemisphere
420.2
2531
Female, age 67, both hemispheres
320.1
1927
Female, age 91, both hemispheres
260.0
Entorhinal gyrus nTPM: 426.2
2117
Female, age 91, right hemisphere
570.6
1938
Female, age 85, left hemisphere
455.2
2686
Male, age 75, right hemisphere
432.1
1787
Male, age 76, left hemisphere
405.5
2764
Male, age 80, right hemisphere
403.7
2613
Female, age 94, left hemisphere
289.9
Hippocampus, CA1 nTPM: 415.3
2527
Male, age 74, both hemispheres
692.8
2045
Male, age 76, both hemispheres
415.7
2082
Female, age 91, right hemisphere
349.8
1873
Female, age 85, both hemispheres
323.0
2749
Male, age 80, left hemisphere
295.0
Hippocampus, CA2 nTPM: 382.5
2249
Male, age 74, both hemispheres
480.1
2437
Female, age 94, left hemisphere
425.0
1892
Male, age 76, both hemispheres
401.1
1940
Female, age 85, left hemisphere
393.3
2113
Female, age 91, right hemisphere
380.0
1963
Male, age 80, left hemisphere
215.5
Hippocampus, CA3 nTPM: 461.8
2436
Male, age 74, both hemispheres
581.3
1891
Female, age 85, both hemispheres
503.3
2620
Female, age 94, left hemisphere
464.3
2861
Female, age 67, both hemispheres
449.3
1867
Male, age 76, both hemispheres
426.3
2137
Male, age 80, left hemisphere
346.0
Parahippocampal cortex nTPM: 465.2
2692
Male, age 74, both hemispheres
660.3
2622
Female, age 67, right hemisphere
523.4
2250
Female, age 67, right hemisphere
488.7
2532
Female, age 72, left hemisphere
472.6
1933
Female, age 85, both hemispheres
459.9
2018
Male, age 76, both hemispheres
456.1
2245
Female, age 91, both hemispheres
427.0
1850
Male, age 80, both hemispheres
426.3
1990
Female, age 91, right hemisphere
419.7
2693
Female, age 94, both hemispheres
317.6
Perirhinal gyrus nTPM: 345.1
1794
Male, age 80, right hemisphere
463.8
1847
Female, age 91, left hemisphere
387.9
1841
Female, age 85, right hemisphere
347.0
2521
Female, age 94, right hemisphere
309.8
2848
Male, age 76, right hemisphere
216.9
Subiculum nTPM: 495.1
2619
Male, age 74, both hemispheres
730.0
2042
Male, age 76, both hemispheres
527.9
2438
Female, age 94, left hemisphere
468.0
1977
Female, age 85, both hemispheres
459.9
1901
Male, age 80, both hemispheres
425.4
2729
Female, age 91, right hemisphere
359.5
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
476.8
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 476.8
Samples: 197
Max nTPM: 3826.7
Min nTPM: 123.0
Std nTPM: 462.5
Median nTPM: 354.0
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
3826.7
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
3716.3
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
2675.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1650.6
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
1610.0
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
1425.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
1411.7
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
1391.0
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1310.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
1247.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
1193.7
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
1081.0
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
959.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
949.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
916.9
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
910.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
879.6
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
876.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
834.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
815.8
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
798.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
754.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
752.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
731.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
718.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
717.8
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
715.8
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
702.0
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
693.7
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
678.5
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
645.8
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
638.2
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
638.2
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
634.6
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
627.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
605.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
594.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
582.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
574.7
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
567.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
550.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
550.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
547.3
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
545.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
543.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
540.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
539.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
537.5
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
529.5
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
528.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
528.3
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
522.6
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
520.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
520.2
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
516.4
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
509.1
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
508.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
507.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
507.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
506.4
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
506.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
496.3
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
489.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
488.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
488.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
484.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
470.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
461.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
460.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
454.5
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
433.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
430.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
428.2
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
420.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
419.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
417.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
416.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
414.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
412.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
411.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
409.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
407.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
402.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
397.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
396.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
395.5
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
395.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
389.7
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
383.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
382.2
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
378.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
377.7
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
372.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
369.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
362.7
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
360.0
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
359.1
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
354.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
354.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
352.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
350.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
350.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
349.4
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
347.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
347.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
346.8
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
346.8
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
343.1
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
340.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
325.5
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
324.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
321.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
317.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
317.4
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
316.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
315.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
313.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
311.8
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
310.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
309.7
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
308.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
305.4
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
303.1
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
300.7
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
300.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
298.7
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
295.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
294.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
294.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
294.3
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
292.8
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
291.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
284.5
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
283.3
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
282.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
280.0
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
280.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
279.8
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
275.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
273.6
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
272.0
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
268.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
267.5
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
266.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
264.1
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
260.9
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
256.6
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
256.0
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
254.0
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
242.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
241.6
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
238.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
235.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
228.0
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
226.4
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
221.9
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
216.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
212.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
209.2
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
207.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
206.6
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
206.1
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
204.6
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
203.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
200.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
199.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
198.8
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
195.7
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
190.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
190.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
188.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
188.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
187.1
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
186.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
185.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
185.2
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
184.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
180.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
180.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
177.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
173.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
171.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
171.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
168.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
163.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
161.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
160.7
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
155.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
153.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
151.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
150.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
149.8
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
143.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
142.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
132.3
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
130.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
123.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.