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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
200.7
nTPM
HPA Brain:
154.6
nTPM
GTEx:
200.7
nTPM
FANTOM5:
142.8
Scaled Tags Per Million
Pig:
133.9
nTPM
Mouse:
372.4
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
154.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 125.3
2411
Female, age 72, unknown
151.4
1827
Male, age 72, unknown
150.0
2019
Male, age 18, unknown
139.3
1870
Female, age 42, unknown
138.9
2828
Female, age 72, unknown
126.8
2219
Male, age 76, both hemispheres
123.9
1833
Male, age 53, unknown
115.0
2666
Male, age 74, left hemisphere
114.3
1830
Male, age 51, unknown
103.7
2586
Male, age 75, left hemisphere
90.0
Dorsal raphe nucleus nTPM: 142.6
2298
Female, age 72, unknown
177.2
1828
Male, age 53, unknown
144.2
2750
Male, age 76, both hemispheres
140.1
2047
Male, age 72, unknown
131.5
2016
Female, age 72, unknown
120.2
Inferior colliculus nTPM: 145.9
2097
Female, age 72, unknown
163.8
1890
Male, age 53, unknown
155.4
1848
Female, age 42, unknown
132.3
2849
Male, age 72, unknown
132.0
Median raphe nucleus nTPM: 141.1
2220
Male, age 76, midline
141.1
Periaquaductal grey, anterior nTPM: 132.7
1947
Male, age 18, unknown
142.7
1795
Male, age 51, unknown
129.5
2502
Female, age 75, unknown
126.0
Periaquaductal grey, dorsal nTPM: 131.6
2850
Male, age 76, both hemispheres
143.6
1840
Male, age 53, unknown
140.3
2464
Female, age 72, unknown
121.7
1831
Male, age 72, unknown
120.9
Periaquaductal grey, lateral nTPM: 121.4
2272
Male, age 74, both hemispheres
128.2
2140
Male, age 76, both hemispheres
122.7
2053
Male, age 18, unknown
113.4
Pretectal area nTPM: 153.9
1816
Male, age 51, unknown
191.3
2007
Male, age 72, unknown
190.3
1817
Female, age 42, unknown
189.2
1944
Female, age 72, unknown
184.2
1815
Male, age 53, unknown
159.6
2667
Female, age 75, unknown
155.6
2273
Male, age 74, both hemispheres
143.2
2224
Female, age 72, unknown
135.6
2825
Male, age 18, unknown
120.5
2316
Male, age 76, right hemisphere
114.8
2407
Male, age 75, both hemispheres
108.6
Red nucleus nTPM: 136.8
1821
Female, age 72, unknown
172.9
2823
Male, age 76, right hemisphere
151.5
2503
Female, age 72, unknown
150.3
2785
Male, age 18, unknown
146.5
2769
Male, age 72, unknown
141.6
1865
Male, age 51, unknown
141.4
2227
Male, age 72, unknown
139.2
1954
Female, age 42, unknown
137.5
2725
Female, age 75, unknown
132.4
1904
Male, age 53, unknown
119.6
2588
Male, age 74, left hemisphere
111.6
2584
Male, age 75, left hemisphere
97.7
Substantia nigra nTPM: 154.6
1889
Female, age 72, unknown
190.5
1916
Female, age 42, unknown
187.5
1941
Male, age 53, unknown
169.0
1851
Male, age 51, unknown
167.1
2699
Male, age 18, unknown
151.1
2409
Female, age 72, unknown
148.4
2590
Female, age 75, unknown
147.7
2665
Male, age 74, both hemispheres
147.1
2241
Male, age 72, unknown
136.4
2583
Male, age 75, right hemisphere
101.1
Superior colliculus nTPM: 133.1
1895
Male, age 76, right hemisphere
162.2
2087
Female, age 72, unknown
151.3
2668
Female, age 75, unknown
142.1
2587
Male, age 74, left hemisphere
141.3
1796
Male, age 53, unknown
140.6
2261
Male, age 18, unknown
136.1
1913
Female, age 42, unknown
123.2
1995
Male, age 72, unknown
115.4
1839
Male, age 51, unknown
114.2
2664
Male, age 75, both hemispheres
104.4
Ventral tegmental area nTPM: 143.0
2410
Female, age 72, unknown
168.0
2218
Male, age 76, both hemispheres
156.9
1915
Female, age 42, unknown
154.2
1942
Male, age 51, unknown
138.0
2223
Female, age 72, unknown
122.0
2021
Male, age 53, unknown
118.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
200.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 200.7
Samples: 139
Max nTPM: 376.2
Min nTPM: 90.5
Std nTPM: 52.1
Median nTPM: 192.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
376.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
356.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
335.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
319.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
315.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
313.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
310.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
300.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
296.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
294.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
293.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
289.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
284.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
277.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
274.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
267.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
266.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
266.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
259.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
256.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
253.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
253.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
250.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
246.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
242.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
241.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
238.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
238.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
238.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
237.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
235.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
231.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
229.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
228.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
224.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
222.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
222.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
221.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
220.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
216.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
216.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
216.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
216.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
213.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
213.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
212.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
211.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
211.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
210.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
208.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
207.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
206.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
203.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
201.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
201.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
201.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
200.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
200.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
200.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
200.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
199.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
198.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
198.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
197.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
197.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
195.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
194.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
193.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
192.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
192.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
192.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
191.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
191.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
191.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
191.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
190.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
190.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
190.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
190.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
186.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
182.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
182.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
182.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
181.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
180.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
179.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
179.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
178.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
177.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
177.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
177.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
177.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
176.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
176.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
176.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
175.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
174.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
171.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
171.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
170.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
169.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
169.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
168.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
167.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
165.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
164.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
163.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
162.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
161.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
160.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
160.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
159.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
158.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
158.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
158.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
155.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
154.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
151.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
148.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
146.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
145.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
145.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
145.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
143.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
141.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
141.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
140.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
139.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
139.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
137.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
132.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
129.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
126.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
124.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
122.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
115.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
114.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
108.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
90.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
372.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 372.4
Samples: 4
Max nTPM: 392.1
Min nTPM: 348.5
Sample A
Male
384.5
Sample B
Male
364.5
Sample C
Female
348.5
Sample D
Female
392.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.