HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:637.1 nTPM
HPA Brain:229.9 nTPM
GTEx:637.1 nTPM
FANTOM5:334.5 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:302.3 nTPM
Allen mouse:12.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003373
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 229.9
Sample id Sample description nTPM
Hippocampus
nTPM: 229.8
1898 Male, age 80, left hemisphere 276.6
1855 Male, age 76, left hemisphere 245.8
2529 Female, age 94, left hemisphere 241.7
2621 Female, age 67, right hemisphere 238.1
1911 Female, age 85, right hemisphere 203.7
2148 Female, age 91, left hemisphere 172.8
Dentate gyrus
nTPM: 209.5
2010 Male, age 76, both hemispheres 257.3
2530 Female, age 94, left hemisphere 255.8
2246 Female, age 85, both hemispheres 203.1
2531 Female, age 67, both hemispheres 186.7
1927 Female, age 91, both hemispheres 177.8
2528 Male, age 74, both hemispheres 176.5
Entorhinal gyrus
nTPM: 199.2
2686 Male, age 75, right hemisphere 221.3
1938 Female, age 85, left hemisphere 215.4
1787 Male, age 76, left hemisphere 211.3
2117 Female, age 91, right hemisphere 201.6
2764 Male, age 80, right hemisphere 189.0
2613 Female, age 94, left hemisphere 156.3
Hippocampus, CA1
nTPM: 208.2
2045 Male, age 76, both hemispheres 236.8
1873 Female, age 85, both hemispheres 228.7
2749 Male, age 80, left hemisphere 204.4
2082 Female, age 91, right hemisphere 186.0
2527 Male, age 74, both hemispheres 184.9
Hippocampus, CA2
nTPM: 217.8
1892 Male, age 76, both hemispheres 250.2
1963 Male, age 80, left hemisphere 238.1
1940 Female, age 85, left hemisphere 226.8
2437 Female, age 94, left hemisphere 212.5
2113 Female, age 91, right hemisphere 195.9
2249 Male, age 74, both hemispheres 183.2
Hippocampus, CA3
nTPM: 190.8
1867 Male, age 76, both hemispheres 250.4
1891 Female, age 85, both hemispheres 215.4
2436 Male, age 74, both hemispheres 195.8
2137 Male, age 80, left hemisphere 180.4
2861 Female, age 67, both hemispheres 173.2
2620 Female, age 94, left hemisphere 129.4
Parahippocampal cortex
nTPM: 203.1
2018 Male, age 76, both hemispheres 281.6
1850 Male, age 80, both hemispheres 245.7
2532 Female, age 72, left hemisphere 209.8
1990 Female, age 91, right hemisphere 207.7
1933 Female, age 85, both hemispheres 201.1
2250 Female, age 67, right hemisphere 200.8
2245 Female, age 91, both hemispheres 194.4
2692 Male, age 74, both hemispheres 191.4
2693 Female, age 94, both hemispheres 149.7
2622 Female, age 67, right hemisphere 148.5
Perirhinal gyrus
nTPM: 229.9
1841 Female, age 85, right hemisphere 246.7
1847 Female, age 91, left hemisphere 245.7
2848 Male, age 76, right hemisphere 234.4
1794 Male, age 80, right hemisphere 233.5
2521 Female, age 94, right hemisphere 188.9
Subiculum
nTPM: 225.6
2042 Male, age 76, both hemispheres 269.0
2438 Female, age 94, left hemisphere 256.6
1977 Female, age 85, both hemispheres 235.8
1901 Male, age 80, both hemispheres 218.7
2729 Female, age 91, right hemisphere 189.7
2619 Male, age 74, both hemispheres 184.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 637.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 637.1
Samples: 255

Max nTPM: 1990.4
Min nTPM: 346.2
Std nTPM: 179.4
Median nTPM: 606.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1990.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1404.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1242.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1236.8
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1188.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1119.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1060.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 978.2
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 956.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 952.0
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 951.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 334.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 334.5
FF:10169-103B7 60 years, female 452.8
FF:10153-102I9 76 years, female 216.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.5
Pig sample Sample description nTPM
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 26.9
Min nTPM: 12.7
Sample A Female 12.7
Sample B Female 25.5
Sample C Male 23.9
Sample D Male 26.9
Dorsal hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 21.7
Min nTPM: 14.1
Sample A Female 14.1
Sample B Female 17.1
Sample C Male 21.7
Sample D Male 17.1
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 25.8
Min nTPM: 19.9
Sample A Female 20.9
Sample B Female 19.9
Sample C Male 23.3
Sample D Male 25.8
Ventral hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 33.0
Min nTPM: 10.2
Sample A Female 33.0
Sample B Female 27.0
Sample C Male 15.5
Sample D Male 10.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 302.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 300.8
Samples: 4

Max nTPM: 319.4
Min nTPM: 288.9
Sample A Male 294.2
Sample B Male 288.9
Sample C Female 319.4
Sample D Female 300.7
Hippocampal formation
nTPM: 302.3
Samples: 4

Max nTPM: 332.9
Min nTPM: 278.7
Sample A Male 332.9
Sample B Male 289.7
Sample C Female 307.8
Sample D Female 278.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.9
68441454 Antisense, RP_041214_02_D04, Mouse strain C57BL/6J (56 days, male) 14.6
70813131 Antisense, RP_050712_03_C03, Mouse strain C57BL/6J (56 days, male) 12.1
74819237 Antisense, RP_060315_02_C01, Mouse strain C57BL/6J (56 days, male) 12.1

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