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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • ROMO1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:57.2 nTPM
GTEx:166.8 nTPM
FANTOM5:39.2 Scaled Tags Per Million
Macaque:73.9 nTPM
Pig:28.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.2
Sample id Sample description nTPM
Putamen
nTPM: 57.2
2482 Female, age 94, left hemisphere 73.4
1937 Female, age 91, right hemisphere 59.7
2647 Male, age 75, left hemisphere 59.1
2466 Female, age 79, unknown 57.5
1838 Male, age 80, right hemisphere 56.8
2489 Female, age 72, unknown 54.9
1829 Male, age 74, unknown 38.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 166.8
Samples: 254

Max nTPM: 479.8
Min nTPM: 58.1
Std nTPM: 51.4
Median nTPM: 158.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 479.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 400.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 359.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 337.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 336.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 304.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 302.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 284.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 269.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 264.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 263.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 260.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 257.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 256.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 251.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 239.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 238.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 236.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 234.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 234.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 232.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 230.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 229.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 229.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 228.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 228.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 227.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 227.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 227.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 225.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 224.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 223.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 220.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 214.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 210.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 209.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 209.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 208.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 207.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 205.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 205.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 205.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 204.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 204.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 202.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 200.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 200.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 199.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 198.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 195.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 194.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 194.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 194.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 193.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 192.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 189.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 189.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 189.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 188.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 187.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 187.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 186.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 186.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 185.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 184.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 183.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 182.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 182.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 181.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 180.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 180.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 180.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 179.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 179.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 178.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 178.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 178.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 176.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 176.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 175.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 175.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 174.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 173.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 173.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 173.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 172.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 172.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 171.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 170.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 170.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 170.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 170.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 169.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 169.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 169.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 169.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 168.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 168.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 167.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 167.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 167.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 167.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 167.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 166.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 166.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 166.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 166.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 166.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 166.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 164.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 164.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 164.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 164.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 164.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 163.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 163.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 162.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 162.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 161.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 161.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 161.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 161.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 160.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 160.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 160.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 159.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 159.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 158.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 158.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 157.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 157.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 157.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 156.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 156.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 155.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 155.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 155.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 154.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 154.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 154.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 154.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 153.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 153.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 152.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 152.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 151.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 151.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 151.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 151.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 151.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 150.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 150.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 150.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 149.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 149.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 149.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 148.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 147.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 147.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 147.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 146.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 145.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 145.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 144.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 143.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 143.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 143.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 142.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 141.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 141.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 141.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 140.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 140.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 140.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 140.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 140.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 139.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 139.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 139.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 139.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 139.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 138.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 138.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 138.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 138.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 137.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 136.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 136.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 136.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 134.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 134.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 133.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 133.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 132.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 132.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 131.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 131.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 131.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 131.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 131.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 131.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 131.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 130.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 129.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 129.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 129.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 128.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 127.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 127.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 125.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 125.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 125.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 125.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 124.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 123.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 123.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 122.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 122.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 121.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 121.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 121.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 120.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 119.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 119.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 117.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 117.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 117.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 116.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 116.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 116.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 115.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 115.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 115.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 114.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 114.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 113.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 112.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 111.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 109.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 108.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 108.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 107.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 105.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 105.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 104.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 103.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 99.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 99.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 95.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 91.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 86.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 85.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 60.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 58.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

39.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 39.2
FF:10176-103C5 60 years, female 39.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.9
Macaque sample Sample description nTPM
Putamen
nTPM: 73.9
Samples: 2

Max nTPM: 82.2
Min nTPM: 65.6
Sample A 65.6
Sample B 82.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.1
Pig sample Sample description nTPM
Putamen
nTPM: 28.1
Samples: 3

Max nTPM: 37.2
Min nTPM: 21.6
Sample B Female 21.6
Sample C Male 37.2
Sample D Male 25.4

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