We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PRDX5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PRDX5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:426.8 nTPM
HPA Brain:287.7 nTPM
GTEx:426.8 nTPM
Pig:97.5 nTPM
Mouse:213.2 nTPM
Allen mouse:5.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

287.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 261.0
2226 Male, age 75, left hemisphere 338.9
1961 Female, age 42, unknown 183.1
Dorsomedial nucleus
nTPM: 227.9
2041 Female, age 72, unknown 268.3
1989 Male, age 62, unknown 235.2
2017 Female, age 42, unknown 180.1
Lateral hypothalamic area
nTPM: 287.7
1791 Male, age 80, right hemisphere 346.4
2228 Male, age 66, unknown 327.3
2271 Male, age 75, both hemispheres 279.4
2412 Male, age 62, unknown 197.8
Mammillary body
nTPM: 243.8
1923 Female, age 72, unknown 319.8
2413 Male, age 66, unknown 258.4
1948 Female, age 72, unknown 241.3
1945 Male, age 80, right hemisphere 209.2
1834 Female, age 42, unknown 190.2
Paraventricular nucleus
nTPM: 230.6
2700 Male, age 62, unknown 230.6
Preoptic area
nTPM: 220.6
1907 Male, age 80, right hemisphere 256.0
1861 Female, age 42, unknown 204.8
2414 Female, age 72, unknown 200.9
Supraoptic nucleus
nTPM: 247.7
2835 Female, age 72, unknown 269.6
2043 Male, age 62, unknown 237.1
1894 Female, age 72, unknown 236.5
Ventromedial nucleus
nTPM: 219.2
1982 Female, age 72, unknown 226.9
1822 Female, age 42, unknown 211.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

426.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 426.8
Samples: 257

Max nTPM: 857.4
Min nTPM: 184.0
Std nTPM: 111.1
Median nTPM: 412.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 857.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 771.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 758.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 736.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 704.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 700.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 678.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 662.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 657.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 649.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 643.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 643.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 619.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 618.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 617.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 614.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 603.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 603.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 598.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 598.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 596.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 596.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 589.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 580.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 579.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 575.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 575.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 562.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 561.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 559.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 556.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 553.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 552.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 551.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 547.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 542.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 540.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 539.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 538.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 537.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 536.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 531.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 527.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 526.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 523.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 522.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 520.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 520.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 513.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 511.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 510.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 508.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 506.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 505.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 503.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 501.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 499.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 497.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 496.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 495.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 495.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 494.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 492.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 491.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 490.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 490.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 490.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 489.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 486.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 486.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 485.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 484.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 484.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 483.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 483.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 482.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 481.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 478.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 478.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 477.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 475.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 473.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 473.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 464.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 464.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 463.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 462.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 461.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 460.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 460.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 460.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 457.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 456.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 452.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 452.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 450.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 448.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 447.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 443.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 442.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 441.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 439.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 439.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 435.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 435.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 432.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 430.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 430.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 428.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 428.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 427.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 425.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 424.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 423.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 422.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 421.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 421.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 420.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 419.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 419.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 415.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 415.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 414.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 414.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 414.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 413.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 413.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 413.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 412.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 412.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 412.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 411.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 411.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 410.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 410.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 409.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 408.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 408.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 408.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 407.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 406.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 404.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 404.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 404.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 403.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 402.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 402.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 400.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 398.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 398.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 398.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 397.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 396.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 395.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 395.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 393.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 392.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 392.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 391.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 391.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 390.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 388.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 386.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 384.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 383.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 382.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 382.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 381.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 378.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 378.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 375.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 374.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 369.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 367.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 366.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 366.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 365.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 362.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 361.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 359.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 358.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 357.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 357.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 355.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 354.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 354.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 354.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 353.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 351.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 351.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 351.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 349.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 348.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 348.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 347.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 345.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 343.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 343.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 341.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 339.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 339.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 337.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 337.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 337.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 336.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 334.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 334.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 333.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 333.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 331.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 330.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 329.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 329.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 328.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 325.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 322.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 321.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 318.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 317.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 317.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 316.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 316.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 313.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 313.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 313.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 313.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 305.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 304.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 303.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 302.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 301.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 299.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 298.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 296.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 296.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 296.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 292.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 290.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 280.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 274.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 267.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 267.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 263.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 263.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 262.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 257.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 249.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 241.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 239.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 233.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 232.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 229.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 222.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 216.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 209.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 207.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 184.0
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 97.5
Samples: 4

Max nTPM: 145.7
Min nTPM: 60.4
Sample A Female 145.7
Sample B Female 96.3
Sample C Male 87.5
Sample D Male 60.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 213.2
Samples: 4

Max nTPM: 227.7
Min nTPM: 206.1
Sample A Male 210.0
Sample B Male 227.7
Sample C Female 208.9
Sample D Female 206.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.6
69817270 Antisense, RP_050510_03_A05, Mouse strain C57BL/6J (56 days, male) 6.0
76115740 Antisense, RP_060620_02_C08, Mouse strain C57BL/6J (56 days, male) 5.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo