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  • TISSUE

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  • AIF1L
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:95.3 nTPM
HPA Brain:136.6 nTPM
GTEx:95.3 nTPM
Pig:93.3 nTPM
Mouse:5.5 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 27.9
2226 Male, age 75, left hemisphere 36.6
1961 Female, age 42, unknown 19.2
Dorsomedial nucleus
nTPM: 54.6
2017 Female, age 42, unknown 83.1
1989 Male, age 62, unknown 51.8
2041 Female, age 72, unknown 29.0
Lateral hypothalamic area
nTPM: 81.0
2412 Male, age 62, unknown 98.2
2271 Male, age 75, both hemispheres 80.9
2228 Male, age 66, unknown 78.3
1791 Male, age 80, right hemisphere 66.8
Mammillary body
nTPM: 133.2
1945 Male, age 80, right hemisphere 153.0
1948 Female, age 72, unknown 145.5
1834 Female, age 42, unknown 144.3
2413 Male, age 66, unknown 121.7
1923 Female, age 72, unknown 101.8
Paraventricular nucleus
nTPM: 136.6
2700 Male, age 62, unknown 136.6
Preoptic area
nTPM: 89.3
2414 Female, age 72, unknown 126.2
1861 Female, age 42, unknown 105.1
1907 Male, age 80, right hemisphere 36.5
Supraoptic nucleus
nTPM: 85.5
2043 Male, age 62, unknown 111.9
2835 Female, age 72, unknown 87.7
1894 Female, age 72, unknown 56.8
Ventromedial nucleus
nTPM: 26.7
1982 Female, age 72, unknown 31.5
1822 Female, age 42, unknown 21.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 95.3
Samples: 257

Max nTPM: 799.3
Min nTPM: 5.6
Std nTPM: 94.3
Median nTPM: 65.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 799.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 508.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 486.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 462.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 434.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 375.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 346.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 344.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 341.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 285.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 278.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 249.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 240.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 234.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 232.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 231.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 231.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 225.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 225.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 214.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 212.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 211.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 209.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 203.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 200.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 199.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 199.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 198.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 197.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 191.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 183.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 181.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 179.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 178.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 177.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 175.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 173.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 168.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 167.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 164.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 164.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 163.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 163.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 163.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 162.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 161.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 160.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 159.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 158.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 154.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 152.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 147.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 142.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 141.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 137.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 135.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 130.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 126.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 126.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 124.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 124.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 123.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 122.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 122.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 122.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 118.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 113.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 110.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 109.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 109.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 108.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 108.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 107.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 106.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 105.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 104.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 103.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 102.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 101.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 100.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 100.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 98.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 96.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 94.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 93.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 93.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 93.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 92.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 92.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 92.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 92.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 92.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 91.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 90.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 89.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 89.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 87.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 84.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 83.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 83.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 81.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 80.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 79.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 79.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 78.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 77.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 77.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 77.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 76.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 75.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 74.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 74.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 74.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 73.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 73.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 72.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 72.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 72.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 70.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 70.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 69.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 69.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 68.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 68.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 68.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 67.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 67.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 66.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 65.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 65.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 64.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 64.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 62.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 62.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 62.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 61.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 61.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 61.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 60.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 60.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 59.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 58.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 58.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 58.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 57.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 56.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 54.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 54.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 54.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 53.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 53.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 52.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 52.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 52.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 52.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 52.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 52.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 51.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 51.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 50.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 49.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 49.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 49.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 49.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 48.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 48.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 48.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 47.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 46.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 44.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 44.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 44.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 44.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 43.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 43.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 43.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 43.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 42.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 42.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 42.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 42.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 41.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 40.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 40.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 40.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 40.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 39.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 39.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 38.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 38.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 38.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 36.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 36.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 35.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 35.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 35.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 34.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 34.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 33.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 33.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 32.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 32.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 32.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 32.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 32.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 32.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 31.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 31.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 30.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 30.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 30.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 30.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 30.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 29.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 29.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 29.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 29.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 29.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 28.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 28.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 27.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 27.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 27.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 27.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 26.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 26.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 26.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 26.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 24.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 24.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 24.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 23.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 23.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 22.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 21.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 21.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 21.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 20.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 20.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 20.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 20.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 19.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 19.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 18.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 17.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 17.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 17.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 17.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 16.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 16.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 15.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 15.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 12.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 10.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 6.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 5.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 93.3
Samples: 4

Max nTPM: 114.7
Min nTPM: 42.1
Sample A Female 103.9
Sample B Female 114.7
Sample C Male 112.6
Sample D Male 42.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 5.5
Samples: 4

Max nTPM: 5.8
Min nTPM: 5.2
Sample A Male 5.6
Sample B Male 5.8
Sample C Female 5.4
Sample D Female 5.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
67815543 Antisense, RP_040920_01_H02, Mouse strain C57BL/6J (56 days, male) 0.2

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