We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CANX
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CANX
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:136.0 nTPM
HPA Brain:70.8 nTPM
GTEx:136.0 nTPM
Pig:277.5 nTPM
Mouse:338.6 nTPM
Allen mouse:25.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 56.9
2226 Male, age 75, left hemisphere 64.3
1961 Female, age 42, unknown 49.5
Dorsomedial nucleus
nTPM: 50.9
1989 Male, age 62, unknown 56.6
2041 Female, age 72, unknown 49.8
2017 Female, age 42, unknown 46.3
Lateral hypothalamic area
nTPM: 63.0
2228 Male, age 66, unknown 85.3
1791 Male, age 80, right hemisphere 64.7
2271 Male, age 75, both hemispheres 64.4
2412 Male, age 62, unknown 37.5
Mammillary body
nTPM: 55.3
1923 Female, age 72, unknown 66.5
1945 Male, age 80, right hemisphere 56.1
2413 Male, age 66, unknown 53.7
1834 Female, age 42, unknown 50.7
1948 Female, age 72, unknown 49.6
Paraventricular nucleus
nTPM: 70.4
2700 Male, age 62, unknown 70.4
Preoptic area
nTPM: 56.0
2414 Female, age 72, unknown 63.9
1907 Male, age 80, right hemisphere 55.5
1861 Female, age 42, unknown 48.7
Supraoptic nucleus
nTPM: 70.8
1894 Female, age 72, unknown 84.8
2043 Male, age 62, unknown 69.1
2835 Female, age 72, unknown 58.4
Ventromedial nucleus
nTPM: 51.8
1982 Female, age 72, unknown 55.3
1822 Female, age 42, unknown 48.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 136.0
Samples: 257

Max nTPM: 299.8
Min nTPM: 71.1
Std nTPM: 32.2
Median nTPM: 133.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 299.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 269.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 254.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 245.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 243.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 221.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 212.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 210.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 202.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 197.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 193.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 186.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 184.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 184.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 183.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 183.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 180.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 180.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 179.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 178.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 178.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 177.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 176.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 175.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 175.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 173.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 173.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 172.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 171.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 169.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 168.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 167.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 166.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 164.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 164.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 163.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 162.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 161.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 161.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 161.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 160.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 160.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 160.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 159.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 158.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 158.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 157.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 157.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 156.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 156.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 156.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 155.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 155.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 155.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 155.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 155.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 155.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 154.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 154.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 153.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 153.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 153.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 153.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 153.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 152.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 151.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 151.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 151.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 151.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 150.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 150.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 150.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 150.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 150.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 149.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 149.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 149.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 149.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 148.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 148.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 148.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 148.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 148.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 148.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 147.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 146.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 146.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 146.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 144.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 144.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 143.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 143.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 143.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 143.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 142.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 142.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 142.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 141.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 141.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 141.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 140.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 140.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 139.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 138.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 138.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 138.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 138.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 138.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 137.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 137.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 136.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 136.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 136.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 136.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 136.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 136.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 135.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 135.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 135.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 135.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 135.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 135.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 134.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 134.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 134.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 134.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 134.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 133.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 133.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 133.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 133.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 132.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 132.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 131.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 131.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 130.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 130.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 129.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 129.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 129.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 129.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 129.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 129.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 129.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 129.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 128.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 128.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 127.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 127.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 127.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 126.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 126.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 126.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 126.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 126.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 126.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 125.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 125.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 124.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 124.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 124.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 124.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 124.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 124.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 123.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 123.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 123.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 122.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 122.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 121.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 121.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 120.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 119.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 119.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 119.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 119.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 118.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 118.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 118.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 118.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 118.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 118.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 116.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 116.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 116.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 116.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 116.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 115.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 115.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 115.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 114.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 114.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 114.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 114.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 113.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 113.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 112.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 112.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 111.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 111.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 111.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 110.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 110.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 110.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 109.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 109.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 109.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 109.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 109.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 109.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 109.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 109.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 107.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 106.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 105.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 104.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 104.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 104.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 104.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 104.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 103.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 103.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 102.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 101.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 101.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 101.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 101.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 100.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 100.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 100.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 100.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 99.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 98.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 98.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 97.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 97.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 97.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 97.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 96.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 95.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 94.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 94.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 93.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 93.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 93.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 92.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 92.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 90.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 90.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 89.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 85.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 84.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 84.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 83.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 81.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 79.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 71.1
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 277.5
Samples: 4

Max nTPM: 314.6
Min nTPM: 252.7
Sample A Female 314.6
Sample B Female 266.4
Sample C Male 276.4
Sample D Male 252.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

338.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 338.6
Samples: 4

Max nTPM: 354.8
Min nTPM: 325.3
Sample A Male 325.3
Sample B Male 344.9
Sample C Female 354.8
Sample D Female 329.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

25.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 25.9
69080016 Antisense, RP_050324_01_D06, Mouse strain C57BL/6J (56 days, male) 25.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo