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  • TUBA4A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:78.2 nTPM
HPA Brain:122.2 nTPM
GTEx:78.2 nTPM
Pig:77.9 nTPM
Mouse:337.8 nTPM
Allen mouse:8.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 98.4
2226 Male, age 75, left hemisphere 137.0
1961 Female, age 42, unknown 59.9
Dorsomedial nucleus
nTPM: 62.6
1989 Male, age 62, unknown 80.4
2041 Female, age 72, unknown 56.2
2017 Female, age 42, unknown 51.0
Lateral hypothalamic area
nTPM: 122.2
2228 Male, age 66, unknown 181.5
2271 Male, age 75, both hemispheres 108.4
1791 Male, age 80, right hemisphere 106.8
2412 Male, age 62, unknown 92.1
Mammillary body
nTPM: 80.4
1923 Female, age 72, unknown 117.1
2413 Male, age 66, unknown 88.1
1948 Female, age 72, unknown 84.0
1834 Female, age 42, unknown 62.7
1945 Male, age 80, right hemisphere 50.2
Paraventricular nucleus
nTPM: 93.5
2700 Male, age 62, unknown 93.5
Preoptic area
nTPM: 70.4
1907 Male, age 80, right hemisphere 88.1
1861 Female, age 42, unknown 61.6
2414 Female, age 72, unknown 61.6
Supraoptic nucleus
nTPM: 66.6
2835 Female, age 72, unknown 102.4
1894 Female, age 72, unknown 49.1
2043 Male, age 62, unknown 48.4
Ventromedial nucleus
nTPM: 80.7
1982 Female, age 72, unknown 91.1
1822 Female, age 42, unknown 70.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 78.2
Samples: 257

Max nTPM: 180.4
Min nTPM: 13.5
Std nTPM: 33.1
Median nTPM: 77.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 180.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 176.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 169.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 165.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 151.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 142.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 142.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 141.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 141.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 140.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 140.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 139.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 138.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 133.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 133.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 133.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 131.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 129.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 126.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 125.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 125.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 122.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 122.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 122.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 120.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 119.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 119.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 118.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 117.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 116.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 116.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 116.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 115.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 114.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 113.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 113.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 111.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 110.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 110.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 110.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 110.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 109.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 109.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 109.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 109.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 108.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 108.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 108.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 107.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 107.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 106.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 106.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 105.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 105.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 105.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 104.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 104.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 103.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 103.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 103.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 102.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 102.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 102.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 101.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 99.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 99.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 99.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 99.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 99.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 98.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 97.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 97.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 96.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 96.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 96.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 96.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 96.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 95.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 95.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 94.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 94.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 93.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 93.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 92.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 92.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 92.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 92.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 91.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 90.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 90.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 90.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 90.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 89.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 89.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 88.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 88.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 88.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 88.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 87.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 87.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 87.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 87.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 86.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 86.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 85.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 84.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 82.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 82.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 82.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 82.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 82.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 81.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 81.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 81.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 81.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 81.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 80.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 80.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 79.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 79.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 79.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 79.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 79.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 79.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 79.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 79.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 78.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 78.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 77.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 77.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 77.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 77.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 76.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 76.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 76.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 76.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 76.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 76.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 75.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 75.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 74.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 74.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 74.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 73.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 72.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 72.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 72.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 71.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 71.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 71.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 70.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 70.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 70.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 70.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 69.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 69.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 68.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 68.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 68.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 66.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 66.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 66.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 65.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 65.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 65.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 65.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 65.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 64.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 64.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 64.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 64.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 63.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 63.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 62.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 62.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 62.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 62.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 61.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 61.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 58.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 58.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 58.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 58.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 58.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 57.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 57.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 56.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 56.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 56.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 56.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 56.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 56.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 55.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 55.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 53.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 50.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 49.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 49.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 49.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 49.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 49.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 48.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 48.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 48.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 47.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 47.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 46.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 46.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 46.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 45.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 43.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 43.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 43.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 41.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 40.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 40.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 40.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 39.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 39.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 39.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 39.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 38.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 38.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 38.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 37.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 36.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 35.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 35.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 34.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 34.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 34.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 33.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 33.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 31.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 31.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 31.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 30.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 30.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 30.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 29.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 25.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 24.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 24.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 24.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 23.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 23.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 22.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 22.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 21.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 20.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 19.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 19.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 18.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 17.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 13.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 13.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 77.9
Samples: 4

Max nTPM: 105.1
Min nTPM: 57.2
Sample A Female 105.1
Sample B Female 80.8
Sample C Male 68.4
Sample D Male 57.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

337.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 337.9
Samples: 4

Max nTPM: 372.4
Min nTPM: 313.0
Sample A Male 313.0
Sample B Male 372.4
Sample C Female 338.6
Sample D Female 327.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.0
564648 Antisense, RP_040826_01_B04, Mouse strain C57BL/6J (56 days, male) 8.2
70616005 Antisense, RP_050725_01_D08, Mouse strain C57BL/6J (56 days, male) 7.7

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