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  • SUMMARY

  • TISSUE

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  • EMC4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:82.5 nTPM
HPA Brain:69.1 nTPM
GTEx:82.5 nTPM
Pig:53.3 nTPM
Mouse:127.5 nTPM
Allen mouse:8.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 64.1
2226 Male, age 75, left hemisphere 81.0
1961 Female, age 42, unknown 47.1
Dorsomedial nucleus
nTPM: 51.5
1989 Male, age 62, unknown 56.8
2041 Female, age 72, unknown 52.8
2017 Female, age 42, unknown 44.9
Lateral hypothalamic area
nTPM: 69.1
1791 Male, age 80, right hemisphere 78.2
2271 Male, age 75, both hemispheres 76.8
2228 Male, age 66, unknown 72.5
2412 Male, age 62, unknown 49.0
Mammillary body
nTPM: 67.6
1923 Female, age 72, unknown 87.4
2413 Male, age 66, unknown 69.6
1834 Female, age 42, unknown 60.9
1945 Male, age 80, right hemisphere 60.1
1948 Female, age 72, unknown 60.0
Paraventricular nucleus
nTPM: 53.0
2700 Male, age 62, unknown 53.0
Preoptic area
nTPM: 56.5
1907 Male, age 80, right hemisphere 60.7
2414 Female, age 72, unknown 55.8
1861 Female, age 42, unknown 52.8
Supraoptic nucleus
nTPM: 65.9
1894 Female, age 72, unknown 73.8
2043 Male, age 62, unknown 62.9
2835 Female, age 72, unknown 61.0
Ventromedial nucleus
nTPM: 50.2
1982 Female, age 72, unknown 54.2
1822 Female, age 42, unknown 46.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 82.5
Samples: 257

Max nTPM: 133.9
Min nTPM: 44.7
Std nTPM: 14.4
Median nTPM: 82.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 133.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 125.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 125.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 121.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 120.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 116.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 113.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 111.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 110.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 108.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 108.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 108.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 108.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 107.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 106.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 105.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 105.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 102.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 102.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 102.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 102.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 101.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 101.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 101.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 101.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 100.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 99.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 99.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 99.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 99.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 98.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 98.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 97.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 97.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 97.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 96.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 96.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 96.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 96.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 96.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 95.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 95.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 94.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 94.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 94.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 94.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 94.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 93.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 93.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 93.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 93.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 93.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 93.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 93.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 92.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 92.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 92.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 91.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 91.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 91.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 91.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 91.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 91.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 91.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 91.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 90.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 90.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 90.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 90.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 90.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 89.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 89.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 89.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 89.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 89.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 89.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 89.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 89.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 88.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 88.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 88.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 88.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 88.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 88.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 88.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 87.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 87.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 87.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 87.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 87.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 87.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 87.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 86.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 86.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 86.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 86.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 86.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 86.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 86.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 86.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 85.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 85.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 85.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 85.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 85.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 85.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 85.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 85.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 85.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 85.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 85.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 85.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 84.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 84.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 84.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 84.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 84.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 83.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 83.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 83.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 83.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 83.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 83.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 83.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 83.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 82.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 82.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 82.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 82.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 82.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 82.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 81.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 81.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 81.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 81.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 81.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 81.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 80.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 80.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 80.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 80.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 80.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 80.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 80.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 80.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 79.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 79.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 79.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 79.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 79.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 79.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 79.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 79.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 78.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 78.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 78.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 78.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 78.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 77.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 77.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 77.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 77.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 77.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 77.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 77.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 77.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 77.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 76.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 76.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 76.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 76.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 76.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 76.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 76.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 75.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 75.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 75.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 75.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 75.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 75.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 75.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 75.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 74.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 74.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 74.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 74.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 73.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 73.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 73.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 73.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 72.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 72.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 72.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 72.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 72.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 71.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 71.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 71.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 71.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 71.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 71.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 71.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 71.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 70.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 70.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 69.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 69.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 69.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 69.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 68.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 68.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 68.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 68.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 68.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 67.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 67.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 67.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 67.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 66.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 66.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 66.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 66.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 66.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 65.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 65.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 65.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 65.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 65.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 64.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 64.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 64.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 64.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 63.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 63.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 63.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 63.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 63.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 63.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 62.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 62.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 61.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 61.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 60.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 60.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 60.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 59.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 59.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 59.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 57.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 57.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 55.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 54.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 52.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 52.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 47.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 44.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 53.3
Samples: 4

Max nTPM: 64.4
Min nTPM: 42.7
Sample A Female 64.4
Sample B Female 55.2
Sample C Male 50.7
Sample D Male 42.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 127.5
Samples: 4

Max nTPM: 137.7
Min nTPM: 121.2
Sample A Male 124.8
Sample B Male 137.7
Sample C Female 126.4
Sample D Female 121.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.5
68798813 Antisense, RP_050217_01_D02, Mouse strain C57BL/6J (56 days, male) 8.5

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