HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:2.7 nTPM
HPA Brain:50.3 nTPM
GTEx:2.7 nTPM
FANTOM5:135.8 Scaled Tags Per Million
Pig:34.8 nTPM
Mouse:18.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043507
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 50.3
Sample id Sample description nTPM
Hippocampus
nTPM: 48.0
1911 Female, age 85, right hemisphere 50.8
1898 Male, age 80, left hemisphere 48.9
2621 Female, age 67, right hemisphere 48.5
2529 Female, age 94, left hemisphere 47.6
1855 Male, age 76, left hemisphere 46.8
2148 Female, age 91, left hemisphere 45.4
Dentate gyrus
nTPM: 45.6
2528 Male, age 74, both hemispheres 48.1
1927 Female, age 91, both hemispheres 47.8
2010 Male, age 76, both hemispheres 47.2
2246 Female, age 85, both hemispheres 46.7
2531 Female, age 67, both hemispheres 43.4
2530 Female, age 94, left hemisphere 40.2
Entorhinal gyrus
nTPM: 47.3
2117 Female, age 91, right hemisphere 55.7
1938 Female, age 85, left hemisphere 51.8
2764 Male, age 80, right hemisphere 46.1
2686 Male, age 75, right hemisphere 46.0
2613 Female, age 94, left hemisphere 42.5
1787 Male, age 76, left hemisphere 41.8
Hippocampus, CA1
nTPM: 47.2
1873 Female, age 85, both hemispheres 51.2
2527 Male, age 74, both hemispheres 47.5
2082 Female, age 91, right hemisphere 46.5
2749 Male, age 80, left hemisphere 46.0
2045 Male, age 76, both hemispheres 45.0
Hippocampus, CA2
nTPM: 48.2
1963 Male, age 80, left hemisphere 51.2
1892 Male, age 76, both hemispheres 49.2
1940 Female, age 85, left hemisphere 49.1
2113 Female, age 91, right hemisphere 48.5
2249 Male, age 74, both hemispheres 46.6
2437 Female, age 94, left hemisphere 44.3
Hippocampus, CA3
nTPM: 44.2
1891 Female, age 85, both hemispheres 52.1
1867 Male, age 76, both hemispheres 47.9
2436 Male, age 74, both hemispheres 45.1
2137 Male, age 80, left hemisphere 42.4
2861 Female, age 67, both hemispheres 40.5
2620 Female, age 94, left hemisphere 36.9
Parahippocampal cortex
nTPM: 50.2
2693 Female, age 94, both hemispheres 58.5
1933 Female, age 85, both hemispheres 54.9
1850 Male, age 80, both hemispheres 52.4
2692 Male, age 74, both hemispheres 49.9
2018 Male, age 76, both hemispheres 49.6
2532 Female, age 72, left hemisphere 49.6
2250 Female, age 67, right hemisphere 48.4
2245 Female, age 91, both hemispheres 47.6
1990 Female, age 91, right hemisphere 46.3
2622 Female, age 67, right hemisphere 44.8
Perirhinal gyrus
nTPM: 50.2
2521 Female, age 94, right hemisphere 54.0
1841 Female, age 85, right hemisphere 53.4
2848 Male, age 76, right hemisphere 51.1
1847 Female, age 91, left hemisphere 46.6
1794 Male, age 80, right hemisphere 45.9
Subiculum
nTPM: 50.3
1977 Female, age 85, both hemispheres 52.1
1901 Male, age 80, both hemispheres 52.0
2042 Male, age 76, both hemispheres 50.8
2729 Female, age 91, right hemisphere 50.3
2438 Female, age 94, left hemisphere 49.2
2619 Male, age 74, both hemispheres 47.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.7
Samples: 255

Max nTPM: 5.4
Min nTPM: 1.1
Std nTPM: 0.9
Median nTPM: 2.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 5.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 5.4
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 5.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 4.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 4.9
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 4.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 4.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 4.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 4.6
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 4.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 4.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 135.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.8
FF:10153-102I9 76 years, female 141.9
FF:10169-103B7 60 years, female 129.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 34.8
Pig sample Sample description nTPM
Subiculum
nTPM: 34.8
Samples: 4

Max nTPM: 39.9
Min nTPM: 31.8
Sample A Female 39.9
Sample B Female 32.7
Sample C Male 31.8
Sample D Male 34.9
Dorsal hippocampus
nTPM: 31.8
Samples: 4

Max nTPM: 34.1
Min nTPM: 30.2
Sample A Female 30.2
Sample B Female 31.2
Sample C Male 34.1
Sample D Male 31.6
Entorhinal cortex
nTPM: 34.8
Samples: 4

Max nTPM: 36.0
Min nTPM: 33.4
Sample A Female 35.0
Sample B Female 36.0
Sample C Male 33.4
Sample D Male 34.6
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 34.9
Min nTPM: 21.8
Sample A Female 34.9
Sample B Female 34.0
Sample C Male 21.8
Sample D Male 28.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 21.0
Min nTPM: 15.4
Sample A Male 16.9
Sample B Male 15.4
Sample C Female 16.7
Sample D Female 21.0
Hippocampal formation
nTPM: 18.7
Samples: 4

Max nTPM: 23.9
Min nTPM: 13.6
Sample A Male 13.6
Sample B Male 23.0
Sample C Female 23.9
Sample D Female 14.3

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