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  • SUMMARY

  • TISSUE

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  • PSMA1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:67.7 nTPM
HPA Brain:68.0 nTPM
GTEx:67.7 nTPM
Pig:31.9 nTPM
Mouse:124.5 nTPM
Allen mouse:3.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 68.0
2226 Male, age 75, left hemisphere 81.2
1961 Female, age 42, unknown 54.7
Dorsomedial nucleus
nTPM: 46.5
2041 Female, age 72, unknown 56.5
1989 Male, age 62, unknown 43.4
2017 Female, age 42, unknown 39.6
Lateral hypothalamic area
nTPM: 60.8
2228 Male, age 66, unknown 70.3
1791 Male, age 80, right hemisphere 63.7
2271 Male, age 75, both hemispheres 60.7
2412 Male, age 62, unknown 48.4
Mammillary body
nTPM: 53.5
1923 Female, age 72, unknown 72.8
2413 Male, age 66, unknown 58.7
1948 Female, age 72, unknown 49.1
1945 Male, age 80, right hemisphere 44.8
1834 Female, age 42, unknown 42.0
Paraventricular nucleus
nTPM: 46.4
2700 Male, age 62, unknown 46.4
Preoptic area
nTPM: 48.8
1907 Male, age 80, right hemisphere 61.6
1861 Female, age 42, unknown 44.8
2414 Female, age 72, unknown 40.2
Supraoptic nucleus
nTPM: 54.7
1894 Female, age 72, unknown 63.3
2043 Male, age 62, unknown 50.7
2835 Female, age 72, unknown 50.2
Ventromedial nucleus
nTPM: 58.3
1982 Female, age 72, unknown 66.6
1822 Female, age 42, unknown 50.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 67.7
Samples: 257

Max nTPM: 110.8
Min nTPM: 27.5
Std nTPM: 15.5
Median nTPM: 67.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 110.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 107.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 101.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 100.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 99.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 98.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 98.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 97.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 96.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 96.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 95.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 95.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 95.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 93.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 92.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 92.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 92.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 91.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 90.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 90.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 90.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 90.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 89.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 89.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 88.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 88.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 87.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 87.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 87.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 87.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 86.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 86.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 86.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 86.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 85.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 85.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 85.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 84.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 83.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 83.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 83.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 83.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 83.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 82.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 82.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 82.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 82.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 81.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 81.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 81.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 81.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 81.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 80.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 80.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 80.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 80.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 80.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 80.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 80.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 79.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 79.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 79.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 79.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 78.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 78.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 78.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 77.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 77.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 77.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 77.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 77.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 76.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 76.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 76.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 76.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 76.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 76.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 76.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 75.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 75.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 75.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 75.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 75.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 75.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 75.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 75.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 75.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 74.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 74.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 74.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 74.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 74.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 73.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 73.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 73.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 73.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 73.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 73.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 73.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 72.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 72.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 72.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 72.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 71.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 71.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 71.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 71.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 70.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 70.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 70.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 70.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 70.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 70.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 70.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 70.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 69.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 69.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 69.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 69.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 69.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 69.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 69.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 69.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 68.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 68.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 68.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 68.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 68.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 67.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 67.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 67.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 67.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 67.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 67.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 66.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 65.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 65.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 65.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 65.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 65.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 65.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 65.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 65.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 65.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 64.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 64.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 64.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 64.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 64.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 63.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 63.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 63.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 63.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 63.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 63.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 62.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 62.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 62.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 62.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 62.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 62.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 62.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 62.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 62.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 61.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 61.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 61.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 61.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 61.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 61.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 61.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 60.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 60.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 60.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 60.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 60.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 59.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 59.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 59.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 58.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 58.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 58.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 58.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 58.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 58.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 58.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 58.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 57.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 57.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 57.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 57.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 56.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 56.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 56.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 56.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 56.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 55.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 55.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 55.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 54.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 54.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 53.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 53.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 53.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 53.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 53.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 53.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 52.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 52.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 52.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 52.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 51.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 51.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 51.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 51.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 51.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 51.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 51.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 51.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 50.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 50.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 50.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 50.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 48.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 48.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 48.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 48.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 48.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 48.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 48.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 46.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 46.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 46.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 45.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 45.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 45.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 45.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 44.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 44.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 43.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 43.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 43.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 43.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 43.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 42.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 42.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 41.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 40.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 40.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 39.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 39.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 38.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 38.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 38.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 37.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 33.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 27.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 31.9
Samples: 4

Max nTPM: 39.7
Min nTPM: 27.7
Sample A Female 39.7
Sample B Female 31.8
Sample C Male 28.5
Sample D Male 27.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 124.6
Samples: 4

Max nTPM: 129.1
Min nTPM: 121.8
Sample A Male 121.8
Sample B Male 124.9
Sample C Female 129.1
Sample D Female 122.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.0
413778 Antisense, RP_040809_01_C10, Mouse strain C57BL/6J (56 days, male) 3.0

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