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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:267.1 nTPM
HPA Brain:83.6 nTPM
GTEx:267.1 nTPM
Pig:93.6 nTPM
Mouse:230.8 nTPM
Allen mouse:9.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 81.7
2226 Male, age 75, left hemisphere 109.0
1961 Female, age 42, unknown 54.4
Dorsomedial nucleus
nTPM: 58.1
1989 Male, age 62, unknown 65.7
2041 Female, age 72, unknown 62.3
2017 Female, age 42, unknown 46.4
Lateral hypothalamic area
nTPM: 83.6
2228 Male, age 66, unknown 97.3
2271 Male, age 75, both hemispheres 95.9
1791 Male, age 80, right hemisphere 83.1
2412 Male, age 62, unknown 57.9
Mammillary body
nTPM: 70.5
1923 Female, age 72, unknown 88.5
2413 Male, age 66, unknown 71.8
1948 Female, age 72, unknown 69.9
1834 Female, age 42, unknown 61.1
1945 Male, age 80, right hemisphere 60.9
Paraventricular nucleus
nTPM: 71.3
2700 Male, age 62, unknown 71.3
Preoptic area
nTPM: 60.3
1907 Male, age 80, right hemisphere 66.7
1861 Female, age 42, unknown 58.1
2414 Female, age 72, unknown 56.3
Supraoptic nucleus
nTPM: 71.5
2835 Female, age 72, unknown 78.9
1894 Female, age 72, unknown 72.9
2043 Male, age 62, unknown 62.6
Ventromedial nucleus
nTPM: 53.5
1982 Female, age 72, unknown 55.4
1822 Female, age 42, unknown 51.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

267.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 267.1
Samples: 257

Max nTPM: 495.6
Min nTPM: 139.0
Std nTPM: 62.8
Median nTPM: 259.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 495.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 458.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 452.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 452.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 446.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 422.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 421.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 410.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 409.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 408.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 407.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 406.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 402.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 393.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 388.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 388.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 388.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 387.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 371.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 369.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 362.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 362.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 357.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 356.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 353.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 349.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 349.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 345.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 342.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 342.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 341.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 339.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 338.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 334.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 332.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 330.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 330.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 329.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 329.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 328.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 327.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 327.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 326.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 323.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 322.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 322.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 321.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 320.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 319.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 317.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 316.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 316.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 315.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 314.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 313.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 303.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 303.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 302.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 302.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 301.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 299.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 299.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 296.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 295.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 294.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 293.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 293.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 292.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 292.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 292.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 291.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 289.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 289.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 289.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 288.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 288.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 287.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 284.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 283.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 283.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 282.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 281.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 281.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 281.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 281.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 278.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 278.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 277.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 276.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 276.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 276.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 276.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 275.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 275.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 274.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 274.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 273.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 273.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 273.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 273.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 270.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 270.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 269.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 269.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 269.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 268.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 268.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 268.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 267.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 267.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 267.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 266.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 265.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 265.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 265.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 264.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 264.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 263.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 262.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 262.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 261.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 261.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 261.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 260.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 260.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 260.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 260.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 259.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 259.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 259.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 258.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 257.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 257.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 256.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 256.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 255.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 255.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 254.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 254.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 253.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 252.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 252.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 252.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 252.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 251.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 250.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 250.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 249.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 249.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 248.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 247.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 247.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 246.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 244.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 244.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 243.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 243.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 242.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 242.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 241.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 241.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 239.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 239.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 239.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 239.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 238.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 238.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 238.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 237.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 236.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 235.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 235.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 235.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 235.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 234.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 234.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 233.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 233.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 233.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 232.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 231.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 229.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 229.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 229.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 228.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 228.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 226.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 226.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 226.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 226.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 226.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 226.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 226.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 224.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 224.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 223.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 222.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 222.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 220.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 220.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 219.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 219.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 218.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 217.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 217.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 217.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 217.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 217.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 215.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 214.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 214.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 213.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 213.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 212.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 212.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 211.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 210.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 210.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 209.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 208.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 208.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 208.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 207.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 206.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 205.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 205.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 202.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 200.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 198.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 198.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 198.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 197.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 197.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 196.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 194.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 194.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 193.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 192.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 191.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 189.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 187.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 184.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 182.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 181.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 179.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 176.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 176.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 173.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 170.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 169.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 168.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 163.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 159.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 154.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 148.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 141.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 139.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 93.6
Samples: 4

Max nTPM: 124.9
Min nTPM: 68.3
Sample A Female 124.9
Sample B Female 94.1
Sample C Male 86.9
Sample D Male 68.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

230.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 230.9
Samples: 4

Max nTPM: 254.5
Min nTPM: 213.9
Sample A Male 213.9
Sample B Male 254.5
Sample C Female 237.6
Sample D Female 217.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.8
393259 Antisense, RP_040809_01_B01, Mouse strain C57BL/6J (56 days, male) 9.8

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