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  • SUMMARY

  • TISSUE

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  • LSM7
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:78.4 nTPM
HPA Brain:32.6 nTPM
GTEx:78.4 nTPM
Pig:13.0 nTPM
Mouse:89.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 26.8
2226 Male, age 75, left hemisphere 35.4
1961 Female, age 42, unknown 18.2
Dorsomedial nucleus
nTPM: 21.3
2041 Female, age 72, unknown 23.8
1989 Male, age 62, unknown 22.4
2017 Female, age 42, unknown 17.8
Lateral hypothalamic area
nTPM: 32.6
2228 Male, age 66, unknown 39.2
2271 Male, age 75, both hemispheres 37.9
1791 Male, age 80, right hemisphere 37.6
2412 Male, age 62, unknown 15.6
Mammillary body
nTPM: 25.1
1923 Female, age 72, unknown 32.0
1948 Female, age 72, unknown 29.6
1945 Male, age 80, right hemisphere 24.8
1834 Female, age 42, unknown 20.1
2413 Male, age 66, unknown 19.2
Paraventricular nucleus
nTPM: 28.1
2700 Male, age 62, unknown 28.1
Preoptic area
nTPM: 25.6
1907 Male, age 80, right hemisphere 28.0
2414 Female, age 72, unknown 25.1
1861 Female, age 42, unknown 23.6
Supraoptic nucleus
nTPM: 28.9
2043 Male, age 62, unknown 35.0
1894 Female, age 72, unknown 27.6
2835 Female, age 72, unknown 24.1
Ventromedial nucleus
nTPM: 21.4
1982 Female, age 72, unknown 25.7
1822 Female, age 42, unknown 17.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 78.4
Samples: 257

Max nTPM: 188.8
Min nTPM: 19.9
Std nTPM: 19.8
Median nTPM: 75.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 188.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 167.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 160.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 159.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 141.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 132.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 129.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 120.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 116.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 115.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 114.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 113.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 112.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 108.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 107.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 107.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 106.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 105.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 104.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 102.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 102.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 100.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 98.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 98.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 97.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 97.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 96.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 96.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 95.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 95.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 94.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 94.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 94.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 94.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 94.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 94.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 94.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 93.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 93.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 93.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 93.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 93.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 92.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 92.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 92.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 92.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 91.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 91.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 91.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 91.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 91.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 90.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 90.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 90.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 89.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 88.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 88.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 88.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 87.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 87.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 87.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 87.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 87.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 87.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 86.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 86.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 86.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 86.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 85.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 85.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 85.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 85.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 85.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 84.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 84.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 84.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 84.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 84.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 83.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 83.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 82.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 82.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 82.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 82.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 82.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 82.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 82.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 82.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 82.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 82.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 82.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 82.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 81.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 81.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 81.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 81.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 81.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 81.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 81.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 81.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 80.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 80.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 80.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 79.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 79.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 79.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 79.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 78.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 78.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 78.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 78.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 78.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 78.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 77.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 77.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 77.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 77.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 76.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 76.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 76.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 76.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 76.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 76.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 75.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 75.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 75.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 75.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 75.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 75.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 75.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 74.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 74.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 74.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 74.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 74.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 73.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 73.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 73.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 73.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 73.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 73.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 73.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 73.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 73.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 72.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 72.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 72.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 72.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 72.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 72.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 72.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 72.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 72.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 71.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 71.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 71.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 71.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 71.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 71.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 71.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 71.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 70.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 70.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 70.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 70.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 70.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 70.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 70.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 70.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 69.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 69.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 69.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 69.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 69.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 69.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 68.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 68.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 68.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 68.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 68.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 68.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 68.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 68.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 68.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 68.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 68.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 68.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 68.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 67.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 67.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 67.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 67.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 66.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 66.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 66.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 66.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 66.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 66.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 65.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 65.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 65.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 65.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 64.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 64.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 64.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 64.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 64.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 64.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 64.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 64.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 64.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 64.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 64.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 64.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 63.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 63.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 63.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 63.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 63.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 63.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 62.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 61.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 61.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 60.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 60.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 60.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 60.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 60.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 60.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 60.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 59.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 59.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 59.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 59.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 58.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 58.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 58.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 58.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 58.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 57.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 56.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 56.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 56.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 54.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 54.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 53.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 52.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 52.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 51.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 50.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 50.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 49.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 41.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 34.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 25.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 19.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 13.0
Samples: 4

Max nTPM: 18.4
Min nTPM: 7.9
Sample A Female 18.4
Sample B Female 13.0
Sample C Male 12.6
Sample D Male 7.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 89.3
Samples: 4

Max nTPM: 96.9
Min nTPM: 73.9
Sample A Male 96.9
Sample B Male 94.6
Sample C Female 73.9
Sample D Female 91.8

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