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RPL27
HPA
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  • SUMMARY

  • TISSUE

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  • BLOOD

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  • STRUCTURE

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  • RPL27
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:822.4 nTPM
FANTOM5:49.7 Scaled Tags Per Million
Pig:294.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA002649
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

822.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 822.4
Samples: 300

Max nTPM: 2261.1
Min nTPM: 465.9
Std nTPM: 244.8
Median nTPM: 782.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2261.1
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 2080.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1800.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1703.2
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 1681.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1659.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1582.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1496.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1485.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1424.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1349.2
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 1280.2
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 1273.7
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 1272.3
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 1262.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1248.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1210.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1198.5
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 1198.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1179.7
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 1173.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1164.2
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 1151.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1106.0
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 1105.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1103.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1102.4
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 1090.0
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 1086.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1079.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1079.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1070.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1058.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1052.8
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 1050.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1047.7
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 1043.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1029.5
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 1022.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1021.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1020.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1019.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1019.2
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 1016.4
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 1015.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1013.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1007.5
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 996.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 994.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 988.6
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 985.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 983.2
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 982.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 977.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 971.8
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 965.4
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 965.3
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 964.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 961.0
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 955.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 954.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 953.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 952.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 947.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 944.3
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 941.1
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 937.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 936.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 935.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 935.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 935.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 931.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 927.1
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 926.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 925.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 923.3
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 921.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 920.0
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 919.7
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 909.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 903.7
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 903.3
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 901.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 900.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 897.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 893.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 892.6
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 892.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 888.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 884.7
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 883.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 882.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 880.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 878.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 875.0
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 872.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 868.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 867.3
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 866.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 864.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 863.1
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 863.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 858.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 858.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 857.8
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 852.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 851.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 850.4
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 850.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 849.2
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 848.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 847.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 844.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 835.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 835.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 833.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 830.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 830.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 829.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 827.1
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 826.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 825.8
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 823.7
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 822.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 818.6
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 816.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 815.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 813.7
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 813.7
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 810.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 809.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 804.4
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 802.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 800.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 800.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 799.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 796.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 795.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 794.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 792.6
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 792.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 789.4
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 788.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 788.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 787.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 786.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 786.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 786.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 783.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 782.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 782.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 782.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 781.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 776.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 774.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 772.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 769.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 768.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 766.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 762.3
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 761.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 760.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 760.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 759.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 759.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 755.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 754.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 753.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 752.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 752.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 750.1
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 746.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 744.8
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 744.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 744.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 742.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 742.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 739.6
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 738.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 737.5
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 734.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 731.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 728.4
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 727.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 726.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 725.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 723.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 720.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 720.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 718.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 713.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 712.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 710.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 709.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 706.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 704.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 704.1
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 703.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 703.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 702.7
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 700.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 700.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 700.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 698.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 698.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 697.1
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 696.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 695.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 694.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 691.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 689.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 688.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 685.1
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 682.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 682.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 682.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 680.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 680.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 678.8
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 676.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 674.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 670.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 669.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 665.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 665.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 664.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 661.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 660.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 657.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 656.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 653.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 652.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 651.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 649.2
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 646.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 645.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 643.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 639.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 639.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 638.9
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 638.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 638.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 635.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 634.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 633.5
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 627.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 627.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 625.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 625.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 624.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 624.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 621.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 615.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 612.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 612.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 606.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 605.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 604.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 604.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 603.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 602.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 600.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 599.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 598.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 597.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 593.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 592.7
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 591.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 590.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 589.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 588.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 584.8
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 583.7
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 580.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 575.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 571.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 570.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 562.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 558.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 554.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 547.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 540.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 537.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 536.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 525.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 524.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 524.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 521.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 520.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 516.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 515.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 514.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 499.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 498.3
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 495.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 490.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 490.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 488.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 469.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 465.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

49.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 49.7
FF:10164-103B2 76 years, female 49.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

294.3
Pig sample Sample description nTPM
Caudate
nTPM: 294.4
Samples: 4

Max nTPM: 357.0
Min nTPM: 234.6
Sample A Female 357.0
Sample B Female 297.5
Sample C Male 288.3
Sample D Male 234.6

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