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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • MTSS2
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:268.3 nTPM
HPA Brain:548.8 nTPM
GTEx:268.3 nTPM
FANTOM5:404.1 Scaled Tags Per Million
Macaque:102.3 nTPM
Mouse:138.4 nTPM
Rat:126.6 nTPM
Pig:123.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 3120
Sample Intensity
Spinal cord_01
2396
Spinal cord_02
2046
Spinal cord_03
14493
Spinal cord_04
8775
Spinal cord_05
5480
Spinal cord_06
1795
Spinal cord_07
3843
Spinal cord_08
1053

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

548.8
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 453.4
2818 Female, age 79, both hemispheres 502.8
2734 Male, age 80, both hemispheres 502.7
2819 Male, age 47, both hemispheres 423.1
2193 Male, age 75, both hemispheres 385.1
Cervical spinal cord, central gray
nTPM: 543.3
2565 Male, age 75, midline 757.9
2816 Male, age 47, midline 540.2
2048 Male, age 55, midline 529.6
2194 Female, age 79, both hemispheres 468.4
1981 Female, age 72, midline 420.5
Cervical spinal cord, dorsal horn
nTPM: 397.3
2721 Male, age 90, both hemispheres 465.6
1877 Male, age 55, unknown 461.5
2296 Male, age 66, both hemispheres 436.2
2069 Male, age 47, both hemispheres 357.7
2173 Female, age 72, unknown 346.1
2297 Male, age 75, both hemispheres 316.8
Cervical spinal cord, ventral horn
nTPM: 548.8
2480 Male, age 75, both hemispheres 664.1
2809 Male, age 90, both hemispheres 642.9
2295 Male, age 66, both hemispheres 543.7
2820 Female, age 79, both hemispheres 517.6
2098 Female, age 72, unknown 478.1
2068 Male, age 55, unknown 446.4
Dorsal funiculus (white matter)
nTPM: 547.2
2064 Female, age 79, both hemispheres 631.0
2817 Male, age 47, both hemispheres 624.3
2812 Male, age 66, both hemispheres 553.6
2810 Male, age 90, both hemispheres 491.0
2128 Male, age 75, both hemispheres 436.3
Lateral funiculus (white matter)
nTPM: 367.7
2192 Male, age 75, both hemispheres 442.4
2094 Female, age 79, both hemispheres 426.2
2294 Male, age 66, both hemispheres 318.2
2099 Male, age 90, both hemispheres 284.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 268.3
Samples: 204

Max nTPM: 764.7
Min nTPM: 97.7
Std nTPM: 101.2
Median nTPM: 251.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 764.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 704.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 613.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 605.8
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 551.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 509.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 474.9
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 466.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 453.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 453.1
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 444.8
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 442.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 419.5
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 416.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 407.2
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 406.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 402.6
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 400.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 393.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 387.8
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 385.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 385.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 383.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 379.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 376.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 373.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 373.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 368.5
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 365.5
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 361.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 361.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 361.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 355.1
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 354.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 352.4
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 348.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 348.7
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 345.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 343.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 340.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 338.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 338.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 337.6
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 335.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 327.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 325.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 313.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 313.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 312.8
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 311.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 311.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 311.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 311.1
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 309.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 307.9
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 306.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 305.5
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 305.0
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 300.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 300.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 297.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 297.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 295.8
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 294.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 293.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 290.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 288.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 288.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 287.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 286.4
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 286.2
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 285.0
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 283.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 282.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 280.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 277.8
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 276.9
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 275.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 274.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 272.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 269.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 268.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 267.7
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 267.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 266.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 265.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 264.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 264.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 263.8
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 263.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 263.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 263.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 262.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 262.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 259.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 258.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 258.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 257.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 256.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 254.6
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 253.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 253.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 248.6
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 247.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 247.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 246.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 245.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 244.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 243.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 242.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 242.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 241.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 241.1
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 239.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 238.7
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 238.5
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 237.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 237.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 236.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 235.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 235.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 234.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 231.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 231.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 230.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 229.1
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 228.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 228.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 228.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 227.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 226.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 225.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 224.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 224.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 224.2
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 222.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 222.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 218.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 218.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 216.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 211.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 210.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 210.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 208.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 207.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 206.3
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 204.3
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 203.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 202.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 201.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 200.8
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 200.5
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 200.0
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 199.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 198.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 197.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 196.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 194.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 194.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 194.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 192.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 187.7
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 186.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 185.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 184.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 184.3
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 184.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 184.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 183.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 181.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 178.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 178.6
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 178.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 177.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 176.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 174.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 173.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 172.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 169.2
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 168.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 168.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 164.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 164.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 163.3
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 163.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 162.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 156.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 148.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 146.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 146.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 145.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 143.9
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 143.7
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 142.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 142.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 142.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 140.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 137.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 130.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 126.7
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 121.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 117.7
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 100.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 97.7
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

404.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 404.1
FF:10159-103A6 76 years, female 495.1
FF:10181-103D1 60 years, female 313.2

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.3
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 83.4
Samples: 2

Max nTPM: 129.2
Min nTPM: 37.6
Sample A 37.6
Sample B 129.2
Ventral spinal cord
nTPM: 102.3
Samples: 1

Max nTPM: 102.3
Min nTPM: 102.3
Sample A 102.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 97.8
Samples: 4

Max nTPM: 119.2
Min nTPM: 72.5
Sample A Female 113.1
Sample B Female 86.5
Sample C Male 72.5
Sample D Male 119.2
Ventral spinal cord
nTPM: 123.2
Samples: 4

Max nTPM: 131.0
Min nTPM: 117.2
Sample A Female 131.0
Sample B Female 122.2
Sample C Male 122.5
Sample D Male 117.2

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.4
Mouse sample Sample description nTPM
Spinal cord
nTPM: 138.5
Samples: 4

Max nTPM: 161.4
Min nTPM: 115.9
Sample A 115.9
Sample B 161.4
Sample C 139.0
Sample D 137.5

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.6
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 126.7
Samples: 4

Max nTPM: 132.4
Min nTPM: 120.9
Sample A 132.4
Sample A 120.9
Sample A 122.9
Sample A 130.4

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