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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • APCS
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:3389.4 nTPM
HPA:3389.4 nTPM
GTEx:2590.7 nTPM
FANTOM5:3050.3 Scaled Tags Per Million
Macaque:2416.7 nTPM
Pig:324.2 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA053294Antibody CAB007817
Cholangiocytes Not detectedLow
Hepatocytes MediumMedium





LIVER - PROTEINTALKS DB MS
Median intensity 137892
Sample Intensity
Liver_01
81072
Liver_02
154207
Liver_03
150760
Liver_04
302606
Liver_05
65353
Liver_06
140827
Liver_07
127573
Liver_08
134958
Liver_09
161774
Liver_10
87213

LIVER - MANN MS
Median intensity 74729139
Replicate Intensity
Liver_01
74729139
Liver_02
78327124
Liver_03
74497885

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3389.4
N/A
Female, age 60
Liver sample 21
nTPM: 2365.9
overview
Male, age 54
Liver sample 23
nTPM: 2643.3
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 2133.4
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 2580
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 3869
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 3062.7
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 3789.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 3035.2
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 6047.4
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 4367.9
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2590.7
GTEx sample id Sample description nTPM
Liver
Average nTPM: 2590.7
Samples: 262

Max nTPM: 8427.8
Min nTPM: 415.8
Std nTPM: 1181.2
Median nTPM: 2436.1
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 8427.8
GTEX-17HHE-0126-SM-79398 50-59 years, male 6489.5
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 5974.8
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 5635.0
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 5626.9
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 5541.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 5536.9
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 5520.5
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 5015.9
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 4970.7
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 4882.4
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 4817.2
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 4755.8
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 4719.4
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 4684.2
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 4683.9
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 4645.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 4610.6
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 4562.0
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 4548.6
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 4455.0
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 4356.1
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 4274.2
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 4264.2
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 4239.3
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 4160.8
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 4067.2
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 4065.9
GTEX-RU72-1426-SM-46MUF 50-59 years, female 4058.6
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 3989.1
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 3956.5
GTEX-R53T-0326-SM-48FEC 50-59 years, female 3949.8
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 3931.9
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 3931.3
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 3922.4
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 3920.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 3911.5
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 3840.7
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 3830.3
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 3808.5
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 3771.1
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 3740.5
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 3692.1
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 3655.1
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 3634.6
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 3619.2
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 3603.4
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 3595.3
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 3571.2
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 3488.3
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 3449.7
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 3447.8
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 3410.2
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 3409.1
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 3402.4
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 3380.4
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 3326.3
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 3325.9
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 3308.0
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 3300.7
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 3295.2
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 3281.5
GTEX-14PHX-0526-SM-664NW 50-59 years, male 3261.6
GTEX-14E7W-1526-SM-6871X 70-79 years, male 3225.9
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 3217.7
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 3188.1
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 3184.6
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 3175.2
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 3168.0
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 3166.0
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 3155.0
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 3130.9
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 3128.3
GTEX-YECK-1926-SM-4W21H 60-69 years, male 3108.8
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 3094.7
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 3094.1
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 3043.8
GTEX-18A66-2026-SM-7189C 60-69 years, male 3026.5
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 2995.4
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 2976.7
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 2964.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 2950.8
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 2943.9
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 2943.3
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 2935.8
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 2934.2
GTEX-QESD-2026-SM-447BI 20-29 years, male 2924.1
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 2904.0
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 2899.2
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 2882.3
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 2871.5
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 2869.8
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 2857.5
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 2850.7
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 2824.6
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 2801.6
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 2800.9
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 2797.9
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 2782.7
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 2781.9
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 2740.2
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 2734.8
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 2721.6
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 2718.9
GTEX-17F96-1226-SM-79OK2 70-79 years, male 2687.8
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 2677.8
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 2673.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 2669.6
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 2666.8
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 2660.5
GTEX-1B932-1426-SM-793AN 40-49 years, female 2657.1
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 2655.8
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 2643.2
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 2595.4
GTEX-12696-0826-SM-5EGGE 60-69 years, male 2582.0
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 2579.2
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 2559.9
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 2559.4
GTEX-S33H-1626-SM-4AD68 30-39 years, male 2558.1
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 2557.2
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 2556.9
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 2553.9
GTEX-18465-1626-SM-7LG6N 50-59 years, male 2530.2
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 2522.4
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 2517.9
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 2472.5
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 2472.4
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 2464.6
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 2462.3
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 2456.2
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 2444.3
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 2427.9
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 2393.8
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 2390.7
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 2377.9
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 2371.0
GTEX-13113-1326-SM-5GCOI 60-69 years, female 2362.5
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 2357.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 2356.6
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 2344.2
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 2300.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 2284.4
GTEX-QEL4-1226-SM-447A4 50-59 years, male 2272.2
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 2269.1
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 2264.4
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 2262.9
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 2243.5
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 2227.7
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 2221.9
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 2212.7
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 2212.1
GTEX-14JG1-1626-SM-664NH 40-49 years, male 2207.1
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 2194.7
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 2193.1
GTEX-O5YV-0726-SM-EV798 60-69 years, female 2190.4
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 2182.0
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 2163.1
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 2155.2
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 2128.7
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 2110.6
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 2107.4
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 2106.4
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 2091.9
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 2083.0
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 2078.9
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 2073.6
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 2062.4
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 2054.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 2052.6
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 2044.5
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 2041.1
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 2024.2
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 2021.1
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 2003.8
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 1992.4
GTEX-S32W-1926-SM-4AD63 50-59 years, female 1991.2
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 1974.5
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 1949.8
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 1932.3
GTEX-18A7A-1526-SM-72D69 50-59 years, female 1901.3
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 1897.9
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 1887.7
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 1879.1
GTEX-13112-1426-SM-5EGH8 50-59 years, male 1876.7
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 1860.3
GTEX-REY6-1226-SM-48FDR 60-69 years, male 1859.1
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 1850.4
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 1838.7
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 1809.1
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 1801.1
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 1799.6
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 1790.6
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 1764.6
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 1763.2
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 1761.3
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 1755.3
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 1750.8
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 1741.4
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 1727.3
GTEX-RN64-1826-SM-48FDV 50-59 years, male 1723.0
GTEX-X261-1726-SM-4PQYT 50-59 years, male 1712.2
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 1706.7
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 1701.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 1692.0
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 1663.1
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 1649.2
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 1648.8
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 1648.7
GTEX-Q734-0326-SM-48U15 40-49 years, female 1638.6
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 1603.2
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 1577.8
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 1572.0
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 1568.8
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 1545.3
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 1543.7
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 1539.5
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 1538.0
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 1502.7
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 1490.2
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 1452.0
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 1450.8
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 1439.0
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 1403.6
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 1383.7
GTEX-11GSP-0626-SM-5986T 60-69 years, female 1341.7
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 1339.8
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 1339.1
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 1332.5
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 1329.9
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 1327.4
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 1315.9
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 1312.3
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 1307.0
GTEX-14XAO-0226-SM-68728 60-69 years, female 1302.7
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 1300.5
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 1259.5
GTEX-11ZUS-2526-SM-59872 30-39 years, male 1231.8
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 1218.8
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 1218.4
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 1212.2
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 1200.4
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 1198.7
GTEX-111FC-1226-SM-HAV27 60-69 years, male 1189.9
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 1183.2
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 1157.1
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 1139.0
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 1130.3
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 1103.1
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 1056.4
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 1037.1
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 1024.8
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 963.2
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 950.8
GTEX-14PJO-1726-SM-68719 60-69 years, male 935.8
GTEX-1B933-1226-SM-731DW 50-59 years, female 868.3
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 814.4
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 762.6
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 650.3
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 641.6
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 614.6
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 445.9
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 415.8
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3050.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 3050.3
FF:10018-101C9 64,69,70 years, mixed 3050.3

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2416.7
Macaque sample Sample description nTPM
Liver
nTPM: 2416.7
Samples: 3

Max nTPM: 3487.5
Min nTPM: 1508.2
Sample B 3487.5
Sample C 1508.2
Sample D 2254.5

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

324.2
Pig sample Sample description nTPM
Liver
nTPM: 324.2
Samples: 4

Max nTPM: 576.5
Min nTPM: 29.7
Sample A Female 342.6
Sample B Female 29.7
Sample C Male 347.9
Sample D Male 576.5

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