HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:43.6 nTPM
HPA Brain:145.6 nTPM
GTEx:43.6 nTPM
FANTOM5:184.5 Scaled Tags Per Million
Pig:59.6 nTPM
Mouse:64.4 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066228Antibody CAB037086
Glial cells MediumNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 145.6
Sample id Sample description nTPM
Hippocampus
nTPM: 145.6
2529 Female, age 94, left hemisphere 175.4
2148 Female, age 91, left hemisphere 168.8
2621 Female, age 67, right hemisphere 139.8
1898 Male, age 80, left hemisphere 135.4
1911 Female, age 85, right hemisphere 133.2
1855 Male, age 76, left hemisphere 120.9
Dentate gyrus
nTPM: 122.0
2246 Female, age 85, both hemispheres 132.8
2530 Female, age 94, left hemisphere 129.8
2528 Male, age 74, both hemispheres 124.6
1927 Female, age 91, both hemispheres 122.5
2010 Male, age 76, both hemispheres 112.1
2531 Female, age 67, both hemispheres 110.3
Entorhinal gyrus
nTPM: 138.3
1938 Female, age 85, left hemisphere 154.7
2117 Female, age 91, right hemisphere 146.9
2686 Male, age 75, right hemisphere 142.0
1787 Male, age 76, left hemisphere 140.2
2764 Male, age 80, right hemisphere 130.6
2613 Female, age 94, left hemisphere 115.1
Hippocampus, CA1
nTPM: 123.9
2527 Male, age 74, both hemispheres 153.5
1873 Female, age 85, both hemispheres 136.1
2749 Male, age 80, left hemisphere 121.0
2045 Male, age 76, both hemispheres 108.3
2082 Female, age 91, right hemisphere 100.5
Hippocampus, CA2
nTPM: 120.5
1892 Male, age 76, both hemispheres 136.8
2113 Female, age 91, right hemisphere 134.3
2437 Female, age 94, left hemisphere 130.3
1963 Male, age 80, left hemisphere 118.3
2249 Male, age 74, both hemispheres 103.1
1940 Female, age 85, left hemisphere 100.0
Hippocampus, CA3
nTPM: 128.5
2861 Female, age 67, both hemispheres 156.4
2620 Female, age 94, left hemisphere 139.9
1867 Male, age 76, both hemispheres 138.1
1891 Female, age 85, both hemispheres 127.3
2137 Male, age 80, left hemisphere 110.3
2436 Male, age 74, both hemispheres 98.7
Parahippocampal cortex
nTPM: 133.8
2692 Male, age 74, both hemispheres 176.5
2622 Female, age 67, right hemisphere 153.7
2245 Female, age 91, both hemispheres 147.1
1850 Male, age 80, both hemispheres 135.8
1990 Female, age 91, right hemisphere 130.5
1933 Female, age 85, both hemispheres 130.4
2532 Female, age 72, left hemisphere 129.0
2018 Male, age 76, both hemispheres 124.9
2250 Female, age 67, right hemisphere 117.4
2693 Female, age 94, both hemispheres 92.9
Perirhinal gyrus
nTPM: 127.4
1847 Female, age 91, left hemisphere 155.4
1794 Male, age 80, right hemisphere 135.7
1841 Female, age 85, right hemisphere 130.2
2848 Male, age 76, right hemisphere 125.7
2521 Female, age 94, right hemisphere 90.2
Subiculum
nTPM: 139.4
2438 Female, age 94, left hemisphere 181.2
2619 Male, age 74, both hemispheres 164.8
2729 Female, age 91, right hemisphere 146.4
1977 Female, age 85, both hemispheres 126.0
1901 Male, age 80, both hemispheres 116.9
2042 Male, age 76, both hemispheres 101.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.6
Samples: 255

Max nTPM: 91.4
Min nTPM: 16.9
Std nTPM: 13.7
Median nTPM: 41.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 88.0
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 87.3
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 83.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 81.5
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 78.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 78.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 75.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 74.3
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 74.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 72.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 184.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 184.5
FF:10169-103B7 60 years, female 203.5
FF:10153-102I9 76 years, female 165.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 59.6
Pig sample Sample description nTPM
Subiculum
nTPM: 53.4
Samples: 4

Max nTPM: 73.1
Min nTPM: 38.7
Sample A Female 73.1
Sample B Female 52.9
Sample C Male 48.7
Sample D Male 38.7
Dorsal hippocampus
nTPM: 45.3
Samples: 4

Max nTPM: 54.3
Min nTPM: 40.1
Sample A Female 41.5
Sample B Female 45.3
Sample C Male 54.3
Sample D Male 40.1
Entorhinal cortex
nTPM: 59.6
Samples: 4

Max nTPM: 71.6
Min nTPM: 51.2
Sample A Female 51.2
Sample B Female 62.9
Sample C Male 71.6
Sample D Male 52.7
Ventral hippocampus
nTPM: 46.8
Samples: 4

Max nTPM: 61.7
Min nTPM: 32.5
Sample A Female 32.5
Sample B Female 49.9
Sample C Male 61.7
Sample D Male 43.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 64.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 67.9
Min nTPM: 59.5
Sample A Male 66.3
Sample B Male 59.5
Sample C Female 67.9
Sample D Female 64.0
Hippocampal formation
nTPM: 58.1
Samples: 4

Max nTPM: 66.1
Min nTPM: 50.4
Sample A Male 60.7
Sample B Male 55.2
Sample C Female 50.4
Sample D Female 66.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
74058647 Antisense, RP_051019_03_F09, Mouse strain C57BL/6J (56 days, male) 0.6

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo