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  • RPS15A
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
Tissue methods
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1936.6 nTPM
GTEx:1936.6 nTPM
FANTOM5:170.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA047103
Squamous epithelial cells Low



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1936.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1936.6
Samples: 170

Max nTPM: 4768.8
Min nTPM: 1059.2
Std nTPM: 552.1
Median nTPM: 1875.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 4768.8
GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 4559.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 3715.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 3425.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 3393.1
GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 3368.8
GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 2951.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 2938.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 2930.7
GTEX-132AR-1626-SM-5EGHP 50-59 years, female 2795.0
GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 2703.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2643.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2634.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 2604.6
GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 2550.3
GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 2537.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2532.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 2523.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 2440.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 2379.8
GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 2379.5
GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 2377.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2373.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 2358.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2340.9
GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 2338.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 2317.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2302.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 2293.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2288.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 2278.9
GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 2278.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2277.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2250.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2248.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 2248.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2246.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2245.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2230.3
GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 2229.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 2227.7
GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 2219.0
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2212.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 2203.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 2174.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 2171.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 2162.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 2161.9
GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 2149.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2145.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2111.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 2109.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2100.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2085.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2084.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2080.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2077.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 2066.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2055.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2046.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2034.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2024.5
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2023.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 2015.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2010.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1985.0
GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 1979.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1968.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1962.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1948.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1946.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1943.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1941.2
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1922.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1917.6
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1914.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1909.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1908.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1905.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1903.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1894.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1889.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1887.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1881.9
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1879.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1871.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1869.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1863.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1861.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1848.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1838.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 1834.1
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1829.0
GTEX-RNOR-2526-SM-F21KT 50-59 years, female 1828.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1818.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1817.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1800.7
GTEX-147F3-1526-SM-5MR7L 50-59 years, female 1776.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1764.3
GTEX-S4UY-1026-SM-4AD53 40-49 years, female 1761.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1761.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1759.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1749.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1741.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1726.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1718.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1709.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1707.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1707.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1698.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1697.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1684.7
GTEX-14A5I-2726-SM-5MR84 50-59 years, female 1675.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1659.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1654.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1649.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1643.3
GTEX-11I78-2026-SM-5987C 50-59 years, female 1640.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1631.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1619.9
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1603.4
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1597.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1591.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1591.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1590.7
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1583.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1575.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1555.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1548.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1534.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1527.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1513.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 1505.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1499.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1494.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1480.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1474.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1469.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1467.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1465.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1463.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1447.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1441.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1427.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1421.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1419.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1418.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1416.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1408.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1389.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1374.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1369.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1368.8
GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 1364.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1361.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1332.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1329.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1328.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1295.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1286.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1284.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1279.0
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1267.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1264.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1229.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1216.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1210.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1182.9
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1131.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1059.2
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

170.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 170.7
FF:10204-103F6 68 years, female 170.7

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