NARS1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • NARS1
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:70.6 nTPM
HPA:70.6 nTPM
GTEx:48.6 nTPM
FANTOM5:264.4 Scaled Tags Per Million
Macaque:60.2 nTPM
Pig:38.3 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA040017Antibody CAB034257
Cholangiocytes MediumLow
Hepatocytes Not detectedMedium





LIVER - PROTEINTALKS DB MS
Median intensity 13468
Sample Intensity
Liver_01
11734
Liver_02
12657
Liver_03
12880
Liver_04
12312
Liver_05
13337
Liver_06
13599
Liver_07
15197
Liver_08
17834
Liver_09
15882
Liver_10
13649

LIVER - MANN MS
Median intensity 17857484
Replicate Intensity
Liver_01
14691715
Liver_02
18183919
Liver_03
17857483

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.6
N/A
Female, age 60
Liver sample 21
nTPM: 52.1
overview
Male, age 54
Liver sample 23
nTPM: 69.2
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 59.3
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 85.4
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 72.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 73.7
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 68
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 73.7
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 73.2
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 79.7
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.6
GTEx sample id Sample description nTPM
Liver
Average nTPM: 48.6
Samples: 262

Max nTPM: 151.2
Min nTPM: 18.8
Std nTPM: 17.7
Median nTPM: 44.2
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 151.2
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 109.2
GTEX-14XAO-0226-SM-68728 60-69 years, female 108.9
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 101.5
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 95.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 93.7
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 88.6
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 88.1
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 88.0
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 87.2
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 86.2
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 84.6
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 84.1
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 83.0
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 81.8
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 81.0
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 80.5
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 77.5
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 77.2
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 77.1
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 76.6
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 76.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 76.3
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 75.6
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 75.6
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 74.0
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 73.2
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 72.6
GTEX-O5YV-0726-SM-EV798 60-69 years, female 72.4
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 71.3
GTEX-12696-0826-SM-5EGGE 60-69 years, male 69.7
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 69.6
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 68.0
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 67.5
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 67.3
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 67.2
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 66.7
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 66.3
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 66.1
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 65.9
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 64.6
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 64.5
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 64.1
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 64.1
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 63.4
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 62.8
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 62.7
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 62.0
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 61.9
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 61.9
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 61.8
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 61.7
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 61.5
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 60.6
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 60.6
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 60.6
GTEX-R53T-0326-SM-48FEC 50-59 years, female 60.2
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 58.8
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 58.7
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 58.7
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 58.4
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 58.2
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 57.6
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 56.7
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 56.4
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 56.1
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 56.0
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 55.8
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 55.8
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 55.3
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 55.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 54.3
GTEX-S33H-1626-SM-4AD68 30-39 years, male 54.2
GTEX-X261-1726-SM-4PQYT 50-59 years, male 54.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 54.0
GTEX-17HHE-0126-SM-79398 50-59 years, male 53.9
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 53.9
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 53.9
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 53.7
GTEX-18A66-2026-SM-7189C 60-69 years, male 53.6
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 53.5
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 53.5
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 53.5
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 53.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 52.7
GTEX-1B932-1426-SM-793AN 40-49 years, female 52.3
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 52.2
GTEX-QEL4-1226-SM-447A4 50-59 years, male 52.0
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 51.3
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 51.1
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 51.0
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 51.0
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 50.9
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 50.6
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 50.5
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 50.3
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 49.8
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 49.8
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 49.5
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 49.4
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 49.0
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 48.6
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 48.5
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 48.5
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 48.1
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 47.9
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 47.2
GTEX-14PHX-0526-SM-664NW 50-59 years, male 47.0
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 46.9
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 46.7
GTEX-Q734-0326-SM-48U15 40-49 years, female 46.5
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 46.3
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 46.1
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 45.8
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 45.6
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 45.3
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 45.3
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 45.2
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 45.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 45.1
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 44.9
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 44.9
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 44.9
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 44.8
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 44.8
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 44.6
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 44.5
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 44.5
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 44.4
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 44.3
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 44.2
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 44.2
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 44.1
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 43.8
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 43.6
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 43.5
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 43.1
GTEX-RU72-1426-SM-46MUF 50-59 years, female 43.0
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 42.7
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 42.6
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 42.5
GTEX-REY6-1226-SM-48FDR 60-69 years, male 42.5
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 42.4
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 42.4
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 42.4
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 42.3
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 42.1
GTEX-YECK-1926-SM-4W21H 60-69 years, male 42.0
GTEX-17F96-1226-SM-79OK2 70-79 years, male 41.8
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 41.8
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 41.5
GTEX-14JG1-1626-SM-664NH 40-49 years, male 41.5
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 41.4
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 41.3
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 41.3
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 41.2
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 41.1
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 41.1
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 41.1
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 40.9
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 40.8
GTEX-13113-1326-SM-5GCOI 60-69 years, female 40.7
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 40.5
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 40.4
GTEX-QESD-2026-SM-447BI 20-29 years, male 40.0
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 40.0
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 39.9
GTEX-14PJO-1726-SM-68719 60-69 years, male 39.9
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 39.9
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 39.5
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 39.5
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 39.2
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 39.1
GTEX-1399T-0826-SM-5IFES 60-69 years, male 39.0
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 38.9
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 38.9
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 38.8
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 38.8
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 38.6
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 38.6
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 38.5
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 38.5
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 38.5
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 38.3
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 38.3
GTEX-13112-1426-SM-5EGH8 50-59 years, male 38.2
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 37.7
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 37.5
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 37.2
GTEX-1B933-1226-SM-731DW 50-59 years, female 37.0
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 37.0
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 36.9
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 36.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 36.8
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 36.7
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 36.6
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 36.5
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 36.5
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 36.3
GTEX-14E7W-1526-SM-6871X 70-79 years, male 36.1
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 36.0
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 36.0
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 36.0
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 35.9
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 35.7
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 35.7
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 35.6
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 35.6
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 35.6
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 35.5
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 35.4
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 35.3
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 35.2
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 35.2
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 34.9
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 34.7
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 34.6
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 34.6
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 34.1
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 34.1
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 33.8
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 33.8
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 33.7
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 33.7
GTEX-18A7A-1526-SM-72D69 50-59 years, female 33.5
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 33.4
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 33.4
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 33.3
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 32.2
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 32.0
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 32.0
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 31.2
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 31.2
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 31.0
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 31.0
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 30.9
GTEX-RN64-1826-SM-48FDV 50-59 years, male 30.5
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 30.3
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 30.3
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 30.2
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 30.0
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 29.9
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 29.1
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 29.0
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 28.8
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 28.5
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 28.5
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 28.4
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 28.2
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 28.0
GTEX-11GSP-0626-SM-5986T 60-69 years, female 27.4
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 27.3
GTEX-18465-1626-SM-7LG6N 50-59 years, male 27.2
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 26.4
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 26.4
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 26.3
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 26.0
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 25.8
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 24.8
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 23.5
GTEX-111FC-1226-SM-HAV27 60-69 years, male 21.3
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 18.8
Show allShow less

LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

264.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 264.4
FF:10018-101C9 64,69,70 years, mixed 264.4

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.2
Macaque sample Sample description nTPM
Liver
nTPM: 60.2
Samples: 3

Max nTPM: 66.0
Min nTPM: 53.5
Sample B 61.0
Sample C 53.5
Sample D 66.0

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.3
Pig sample Sample description nTPM
Liver
nTPM: 38.3
Samples: 4

Max nTPM: 47.8
Min nTPM: 30.6
Sample A Female 38.7
Sample B Female 36.0
Sample C Male 30.6
Sample D Male 47.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.