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BETA
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  • RBMX2
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:7.0 nTPM
Monaco:15.4 nTPM
Schmiedel:27.4 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

7.0
HPA sample nTPM
Classical monocyte
nTPM: 6.4
Samples: 6

Max nTPM: 8.2
Min nTPM: 4.1
P10809_1003 4.1
P10809_1020 5.0
P10809_1039 7.1
P10809_1058 8.2
P10809_1080 6.6
P10809_1107 7.6
Intermediate monocyte
nTPM: 6.6
Samples: 6

Max nTPM: 7.9
Min nTPM: 5.3
P10809_1004 5.3
P10809_1023 6.8
P10809_1042 7.9
P10809_1061 6.1
P10809_1081 6.6
P10809_1108 7.0
Non-classical monocyte
nTPM: 7.0
Samples: 5

Max nTPM: 8.7
Min nTPM: 3.5
P10809_1005 6.4
P10809_1053 7.8
P10809_1072 3.5
P10809_1082 8.5
P10809_1109 8.7

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

15.4
Monaco sample nTPM
Classical monocyte
nTPM: 14.8
Samples: 4

Max nTPM: 16.6
Min nTPM: 13.0
RHH5313_R3680 13.4
RHH5221_R3593 13.0
RHH5250_R3622 16.1
RHH5279_R3651 16.6
Intermediate monocyte
nTPM: 12.1
Samples: 4

Max nTPM: 21.1
Min nTPM: 6.5
RHH5314_R3681 10.8
RHH5222_R3594 6.5
RHH5251_R3623 21.1
RHH5280_R3652 10.0
Non-classical monocyte
nTPM: 15.4
Samples: 4

Max nTPM: 21.9
Min nTPM: 8.7
RHH5315_R3682 8.7
RHH5223_R3595 17.2
RHH5252_R3624 13.7
RHH5281_R3653 21.9

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

27.4
Schmiedel sample id TPM
Classical monocyte
TPM: 22.6
Samples: 91

Max TPM: 30.4
Min TPM: 11.9
MONOCYTES_1 30.4
MONOCYTES_2 29.1
MONOCYTES_3 27.8
MONOCYTES_4 27.4
MONOCYTES_5 27.4
MONOCYTES_6 27.4
MONOCYTES_7 27.3
MONOCYTES_8 27.0
MONOCYTES_9 26.9
MONOCYTES_10 26.8
MONOCYTES_11 26.6
MONOCYTES_12 26.6
MONOCYTES_13 26.5
MONOCYTES_14 26.4
MONOCYTES_15 26.1
MONOCYTES_16 26.0
MONOCYTES_17 26.0
MONOCYTES_18 25.7
MONOCYTES_19 25.6
MONOCYTES_20 25.5
MONOCYTES_21 25.5
MONOCYTES_22 24.9
MONOCYTES_23 24.6
MONOCYTES_24 24.3
MONOCYTES_25 24.2
MONOCYTES_26 24.2
MONOCYTES_27 24.1
MONOCYTES_28 24.1
MONOCYTES_29 24.0
MONOCYTES_30 24.0
MONOCYTES_31 23.9
MONOCYTES_32 23.8
MONOCYTES_33 23.8
MONOCYTES_34 23.6
MONOCYTES_35 23.5
MONOCYTES_36 23.5
MONOCYTES_37 23.4
MONOCYTES_38 23.3
MONOCYTES_39 23.2
MONOCYTES_40 23.2
MONOCYTES_41 23.0
MONOCYTES_42 23.0
MONOCYTES_43 22.9
MONOCYTES_44 22.8
MONOCYTES_45 22.8
MONOCYTES_46 22.6
MONOCYTES_47 22.5
MONOCYTES_48 22.5
MONOCYTES_49 22.5
MONOCYTES_50 22.3
MONOCYTES_51 22.2
MONOCYTES_52 22.2
MONOCYTES_53 22.2
MONOCYTES_54 22.1
MONOCYTES_55 22.0
MONOCYTES_56 21.9
MONOCYTES_57 21.9
MONOCYTES_58 21.7
MONOCYTES_59 21.7
MONOCYTES_60 21.6
MONOCYTES_61 21.3
MONOCYTES_62 21.3
MONOCYTES_63 21.2
MONOCYTES_64 21.1
MONOCYTES_65 21.1
MONOCYTES_66 21.1
MONOCYTES_67 21.1
MONOCYTES_68 20.5
MONOCYTES_69 20.4
MONOCYTES_70 20.4
MONOCYTES_71 20.3
MONOCYTES_72 20.3
MONOCYTES_73 20.2
MONOCYTES_74 20.1
MONOCYTES_75 20.1
MONOCYTES_76 20.1
MONOCYTES_77 19.7
MONOCYTES_78 19.6
MONOCYTES_79 19.6
MONOCYTES_80 19.5
MONOCYTES_81 19.5
MONOCYTES_82 19.1
MONOCYTES_83 18.6
MONOCYTES_84 18.3
MONOCYTES_85 18.3
MONOCYTES_86 17.9
MONOCYTES_87 17.1
MONOCYTES_88 15.8
MONOCYTES_89 15.8
MONOCYTES_90 14.5
MONOCYTES_91 11.9
Show allShow less
Non-classical monocyte
TPM: 27.4
Samples: 90

Max TPM: 39.2
Min TPM: 17.1
M2_1 39.2
M2_2 35.3
M2_3 33.4
M2_4 33.1
M2_5 32.9
M2_6 32.5
M2_7 32.5
M2_8 32.5
M2_9 32.4
M2_10 31.9
M2_11 31.6
M2_12 31.5
M2_13 31.5
M2_14 31.1
M2_15 31.0
M2_16 30.4
M2_17 30.3
M2_18 30.2
M2_19 30.1
M2_20 29.9
M2_21 29.9
M2_22 29.9
M2_23 29.8
M2_24 29.5
M2_25 29.3
M2_26 29.3
M2_27 29.2
M2_28 29.2
M2_29 29.1
M2_30 29.1
M2_31 29.0
M2_32 28.7
M2_33 28.6
M2_34 28.5
M2_35 28.4
M2_36 28.1
M2_37 28.1
M2_38 27.9
M2_39 27.9
M2_40 27.7
M2_41 27.6
M2_42 27.3
M2_43 27.3
M2_44 27.3
M2_45 27.2
M2_46 27.2
M2_47 27.1
M2_48 27.0
M2_49 26.9
M2_50 26.8
M2_51 26.8
M2_52 26.7
M2_53 26.6
M2_54 26.6
M2_55 26.6
M2_56 26.5
M2_57 26.4
M2_58 26.4
M2_59 26.0
M2_60 26.0
M2_61 26.0
M2_62 25.8
M2_63 25.8
M2_64 25.8
M2_65 25.5
M2_66 25.5
M2_67 25.5
M2_68 25.4
M2_69 24.9
M2_70 24.9
M2_71 24.5
M2_72 24.5
M2_73 24.4
M2_74 24.4
M2_75 24.3
M2_76 24.3
M2_77 24.3
M2_78 23.8
M2_79 23.8
M2_80 23.6
M2_81 23.5
M2_82 23.2
M2_83 23.2
M2_84 23.1
M2_85 22.5
M2_86 21.9
M2_87 21.2
M2_88 18.4
M2_89 17.7
M2_90 17.1
Show allShow less

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