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  • TISSUE

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  • PHC2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:47.0 nTPM
HPA Brain:73.4 nTPM
GTEx:47.0 nTPM
Pig:21.2 nTPM
Mouse:36.8 nTPM
Allen mouse:4.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 50.9
2226 Male, age 75, left hemisphere 53.2
1961 Female, age 42, unknown 48.6
Dorsomedial nucleus
nTPM: 54.3
1989 Male, age 62, unknown 60.5
2017 Female, age 42, unknown 56.8
2041 Female, age 72, unknown 45.7
Lateral hypothalamic area
nTPM: 56.2
2271 Male, age 75, both hemispheres 62.8
1791 Male, age 80, right hemisphere 58.0
2412 Male, age 62, unknown 55.9
2228 Male, age 66, unknown 48.3
Mammillary body
nTPM: 73.4
1834 Female, age 42, unknown 81.5
1923 Female, age 72, unknown 76.8
1948 Female, age 72, unknown 76.7
2413 Male, age 66, unknown 68.6
1945 Male, age 80, right hemisphere 63.4
Paraventricular nucleus
nTPM: 57.1
2700 Male, age 62, unknown 57.1
Preoptic area
nTPM: 55.3
2414 Female, age 72, unknown 62.8
1861 Female, age 42, unknown 55.5
1907 Male, age 80, right hemisphere 47.6
Supraoptic nucleus
nTPM: 56.8
2043 Male, age 62, unknown 61.3
1894 Female, age 72, unknown 55.1
2835 Female, age 72, unknown 53.8
Ventromedial nucleus
nTPM: 41.4
1982 Female, age 72, unknown 42.4
1822 Female, age 42, unknown 40.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 47.0
Samples: 257

Max nTPM: 111.2
Min nTPM: 27.0
Std nTPM: 16.0
Median nTPM: 42.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 111.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 104.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 103.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 94.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 93.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 92.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 92.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 91.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 91.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 91.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 90.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 87.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 85.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 85.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 81.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 80.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 79.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 78.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 74.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 72.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 70.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 69.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 69.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 68.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 68.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 67.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 66.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 66.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 65.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 65.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 63.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 63.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 63.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 62.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 61.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 61.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 61.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 61.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 60.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 59.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 59.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 59.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 59.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 59.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 59.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 58.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 57.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 57.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 57.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 57.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 57.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 56.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 56.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 55.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 55.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 55.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 54.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 54.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 54.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 53.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 53.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 53.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 52.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 52.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 52.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 52.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 52.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 52.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 52.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 52.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 52.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 51.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 51.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 51.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 51.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 51.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 51.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 51.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 51.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 51.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 51.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 50.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 50.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 50.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 50.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 49.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 49.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 49.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 49.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 49.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 48.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 48.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 47.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 47.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 47.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 47.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 47.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 47.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 47.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 46.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 46.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 46.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 46.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 46.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 46.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 46.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 45.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 45.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 45.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 45.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 45.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 45.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 45.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 45.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 44.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 44.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 44.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 44.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 43.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 43.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 43.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 43.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 43.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 43.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 43.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 43.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 43.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 42.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 42.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 42.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 42.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 42.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 42.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 42.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 42.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 42.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 41.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 41.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 41.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 41.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 41.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 41.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 41.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 41.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 41.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 41.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 40.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 40.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 40.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 40.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 40.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 40.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 40.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 40.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 40.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 39.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 39.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 39.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 39.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 39.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 39.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 39.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 38.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 38.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 38.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 38.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 38.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 38.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 38.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 38.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 37.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 37.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 37.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 37.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 37.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 37.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 37.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 37.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 36.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 36.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 36.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 36.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 36.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 36.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 36.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 36.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 36.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 36.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 36.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 36.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 36.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 35.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 35.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 35.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 35.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 35.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 35.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 35.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 35.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 35.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 35.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 35.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 35.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 35.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 35.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 35.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 35.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 35.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 34.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 34.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 34.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 34.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 33.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 33.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 33.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 33.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 33.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 33.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 33.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 32.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 32.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 32.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 32.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 32.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 32.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 32.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 31.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 31.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 31.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 31.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 31.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 31.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 31.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 31.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 31.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 30.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 30.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 30.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 30.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 30.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 30.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 30.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 30.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 29.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 29.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 29.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 29.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 29.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 29.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 28.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 28.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 28.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 27.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 27.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 27.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 27.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 27.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 21.2
Samples: 4

Max nTPM: 23.6
Min nTPM: 16.1
Sample A Female 23.6
Sample B Female 22.8
Sample C Male 22.2
Sample D Male 16.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 36.8
Samples: 4

Max nTPM: 40.4
Min nTPM: 34.7
Sample A Male 40.4
Sample B Male 36.6
Sample C Female 34.7
Sample D Female 35.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.6
68844492 Antisense, RP_050222_01_G08, Mouse strain C57BL/6J (56 days, male) 4.6

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