We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FADS2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • FADS2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:113.5 nTPM
HPA Brain:243.4 nTPM
GTEx:113.5 nTPM
Pig:236.4 nTPM
Mouse:206.6 nTPM
Allen mouse:4.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

243.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 182.1
1961 Female, age 42, unknown 214.6
2226 Male, age 75, left hemisphere 149.5
Dorsomedial nucleus
nTPM: 243.4
1989 Male, age 62, unknown 273.1
2041 Female, age 72, unknown 231.8
2017 Female, age 42, unknown 225.4
Lateral hypothalamic area
nTPM: 189.5
2412 Male, age 62, unknown 245.3
1791 Male, age 80, right hemisphere 243.2
2271 Male, age 75, both hemispheres 159.5
2228 Male, age 66, unknown 110.2
Mammillary body
nTPM: 151.1
1834 Female, age 42, unknown 188.8
2413 Male, age 66, unknown 156.3
1948 Female, age 72, unknown 143.7
1945 Male, age 80, right hemisphere 143.2
1923 Female, age 72, unknown 123.7
Paraventricular nucleus
nTPM: 193.3
2700 Male, age 62, unknown 193.3
Preoptic area
nTPM: 201.4
1861 Female, age 42, unknown 240.4
2414 Female, age 72, unknown 185.7
1907 Male, age 80, right hemisphere 178.1
Supraoptic nucleus
nTPM: 240.6
1894 Female, age 72, unknown 283.4
2043 Male, age 62, unknown 238.8
2835 Female, age 72, unknown 199.7
Ventromedial nucleus
nTPM: 223.5
1982 Female, age 72, unknown 225.7
1822 Female, age 42, unknown 221.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 113.5
Samples: 257

Max nTPM: 294.8
Min nTPM: 28.0
Std nTPM: 41.6
Median nTPM: 107.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 294.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 271.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 236.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 235.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 217.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 209.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 209.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 208.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 195.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 193.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 193.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 191.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 189.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 189.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 188.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 188.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 186.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 181.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 180.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 178.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 173.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 169.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 169.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 169.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 168.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 168.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 165.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 163.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 160.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 159.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 159.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 159.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 159.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 157.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 157.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 156.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 156.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 154.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 154.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 154.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 154.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 153.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 150.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 150.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 149.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 147.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 147.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 147.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 147.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 146.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 145.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 145.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 144.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 144.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 143.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 143.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 143.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 143.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 142.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 141.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 141.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 140.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 138.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 138.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 137.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 137.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 137.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 135.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 135.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 135.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 134.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 134.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 132.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 132.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 131.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 131.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 130.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 130.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 129.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 129.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 129.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 129.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 127.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 127.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 127.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 126.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 126.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 126.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 126.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 125.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 125.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 125.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 124.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 123.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 123.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 122.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 122.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 122.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 121.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 120.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 119.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 119.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 119.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 118.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 118.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 117.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 117.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 115.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 115.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 115.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 115.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 114.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 113.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 112.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 112.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 112.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 112.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 112.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 111.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 111.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 110.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 110.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 109.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 109.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 109.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 109.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 109.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 109.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 107.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 107.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 107.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 107.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 106.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 105.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 105.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 104.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 103.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 103.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 101.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 101.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 101.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 101.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 100.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 100.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 100.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 100.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 99.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 99.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 98.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 98.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 97.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 97.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 97.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 96.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 96.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 96.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 95.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 95.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 95.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 95.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 94.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 94.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 93.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 93.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 92.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 92.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 92.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 92.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 91.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 91.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 90.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 89.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 89.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 89.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 88.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 88.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 88.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 87.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 87.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 87.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 87.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 86.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 85.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 85.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 85.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 84.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 84.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 83.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 83.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 83.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 83.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 83.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 82.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 82.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 81.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 81.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 81.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 81.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 81.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 80.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 80.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 80.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 80.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 80.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 79.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 79.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 79.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 79.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 78.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 78.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 78.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 78.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 77.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 76.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 76.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 76.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 76.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 76.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 75.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 75.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 74.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 74.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 74.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 74.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 73.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 72.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 70.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 70.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 68.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 68.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 68.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 66.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 65.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 63.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 63.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 63.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 63.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 61.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 61.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 61.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 61.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 60.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 58.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 56.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 55.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 54.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 53.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 52.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 51.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 51.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 50.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 49.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 45.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 44.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 42.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 31.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 28.0
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 236.4
Samples: 4

Max nTPM: 273.6
Min nTPM: 202.2
Sample A Female 251.5
Sample B Female 273.6
Sample C Male 218.2
Sample D Male 202.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

206.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 206.7
Samples: 4

Max nTPM: 233.1
Min nTPM: 191.3
Sample A Male 191.3
Sample B Male 233.1
Sample C Female 202.9
Sample D Female 199.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.8
69015290 Antisense, RP_050310_02_F08, Mouse strain C57BL/6J (56 days, male) 4.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo