We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ATP5MC2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ATP5MC2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:370.2 nTPM
HPA Brain:259.7 nTPM
GTEx:370.2 nTPM
Pig:34.1 nTPM
Mouse:24.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

259.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 205.7
2226 Male, age 75, left hemisphere 214.8
1961 Female, age 42, unknown 196.5
Dorsomedial nucleus
nTPM: 213.5
2041 Female, age 72, unknown 226.7
1989 Male, age 62, unknown 209.8
2017 Female, age 42, unknown 204.1
Lateral hypothalamic area
nTPM: 240.9
2228 Male, age 66, unknown 257.4
1791 Male, age 80, right hemisphere 252.0
2271 Male, age 75, both hemispheres 245.5
2412 Male, age 62, unknown 208.9
Mammillary body
nTPM: 252.8
1923 Female, age 72, unknown 286.2
1834 Female, age 42, unknown 259.3
1948 Female, age 72, unknown 247.1
1945 Male, age 80, right hemisphere 242.8
2413 Male, age 66, unknown 228.8
Paraventricular nucleus
nTPM: 259.7
2700 Male, age 62, unknown 259.7
Preoptic area
nTPM: 210.5
1861 Female, age 42, unknown 228.5
2414 Female, age 72, unknown 202.3
1907 Male, age 80, right hemisphere 200.8
Supraoptic nucleus
nTPM: 256.9
2835 Female, age 72, unknown 262.2
1894 Female, age 72, unknown 255.9
2043 Male, age 62, unknown 252.5
Ventromedial nucleus
nTPM: 215.2
1982 Female, age 72, unknown 224.0
1822 Female, age 42, unknown 206.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

370.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 370.2
Samples: 257

Max nTPM: 664.2
Min nTPM: 183.8
Std nTPM: 70.8
Median nTPM: 356.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 664.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 597.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 585.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 562.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 549.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 541.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 526.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 526.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 514.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 513.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 506.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 503.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 503.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 501.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 496.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 495.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 495.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 494.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 492.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 488.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 484.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 479.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 477.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 474.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 471.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 467.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 467.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 466.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 463.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 460.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 459.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 459.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 455.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 453.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 453.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 452.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 452.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 451.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 446.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 442.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 441.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 439.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 436.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 434.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 430.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 427.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 427.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 427.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 425.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 425.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 423.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 423.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 423.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 421.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 421.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 415.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 414.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 410.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 410.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 410.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 406.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 406.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 406.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 404.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 403.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 402.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 401.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 400.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 399.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 398.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 397.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 395.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 395.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 394.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 394.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 392.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 391.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 391.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 391.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 390.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 390.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 390.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 389.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 388.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 388.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 387.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 386.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 386.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 386.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 385.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 385.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 384.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 384.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 383.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 383.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 382.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 382.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 381.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 381.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 381.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 380.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 379.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 378.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 377.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 377.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 376.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 374.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 373.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 373.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 372.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 372.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 371.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 369.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 369.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 368.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 368.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 368.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 366.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 365.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 364.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 364.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 363.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 362.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 361.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 361.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 360.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 357.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 356.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 356.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 356.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 355.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 355.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 354.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 354.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 354.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 353.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 352.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 351.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 351.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 350.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 349.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 349.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 349.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 348.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 348.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 347.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 346.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 345.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 345.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 344.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 344.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 343.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 342.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 341.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 341.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 340.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 340.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 340.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 340.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 340.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 340.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 339.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 338.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 337.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 337.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 337.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 336.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 335.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 335.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 335.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 335.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 334.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 334.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 333.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 333.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 332.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 332.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 332.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 331.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 331.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 330.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 330.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 330.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 330.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 330.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 328.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 327.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 325.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 325.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 324.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 321.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 321.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 321.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 321.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 320.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 319.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 319.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 319.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 319.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 319.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 318.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 318.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 318.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 318.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 318.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 317.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 317.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 316.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 315.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 313.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 312.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 312.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 311.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 311.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 311.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 310.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 309.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 308.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 305.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 305.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 304.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 303.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 302.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 302.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 300.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 300.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 299.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 299.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 299.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 296.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 292.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 289.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 288.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 287.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 286.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 286.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 285.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 285.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 282.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 281.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 280.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 280.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 278.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 276.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 274.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 270.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 269.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 266.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 265.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 261.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 257.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 253.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 250.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 247.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 244.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 198.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 183.8
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 34.1
Samples: 4

Max nTPM: 38.1
Min nTPM: 28.0
Sample A Female 38.1
Sample B Female 35.7
Sample C Male 34.5
Sample D Male 28.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 24.6
Samples: 4

Max nTPM: 31.6
Min nTPM: 18.4
Sample A Male 26.9
Sample B Male 31.6
Sample C Female 21.5
Sample D Female 18.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo