HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:162.1 nTPM
HPA Brain:450.6 nTPM
GTEx:162.1 nTPM
FANTOM5:499.5 Scaled Tags Per Million
Pig:279.1 nTPM
Mouse:315.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023474Antibody HPA075831
Glial cells MediumMedium
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 450.6
Sample id Sample description nTPM
Hippocampus
nTPM: 448.7
2621 Female, age 67, right hemisphere 663.5
2148 Female, age 91, left hemisphere 498.1
1911 Female, age 85, right hemisphere 440.2
2529 Female, age 94, left hemisphere 418.2
1898 Male, age 80, left hemisphere 339.9
1855 Male, age 76, left hemisphere 332.5
Dentate gyrus
nTPM: 389.6
1927 Female, age 91, both hemispheres 567.3
2531 Female, age 67, both hemispheres 532.5
2530 Female, age 94, left hemisphere 395.3
2010 Male, age 76, both hemispheres 287.6
2528 Male, age 74, both hemispheres 285.6
2246 Female, age 85, both hemispheres 269.1
Entorhinal gyrus
nTPM: 331.3
2613 Female, age 94, left hemisphere 542.7
2686 Male, age 75, right hemisphere 389.0
2764 Male, age 80, right hemisphere 294.8
1938 Female, age 85, left hemisphere 293.2
1787 Male, age 76, left hemisphere 249.0
2117 Female, age 91, right hemisphere 219.1
Hippocampus, CA1
nTPM: 421.0
2749 Male, age 80, left hemisphere 620.4
2527 Male, age 74, both hemispheres 480.6
1873 Female, age 85, both hemispheres 357.7
2045 Male, age 76, both hemispheres 332.1
2082 Female, age 91, right hemisphere 314.1
Hippocampus, CA2
nTPM: 345.6
1963 Male, age 80, left hemisphere 542.5
2113 Female, age 91, right hemisphere 375.3
1892 Male, age 76, both hemispheres 341.3
2249 Male, age 74, both hemispheres 303.5
2437 Female, age 94, left hemisphere 301.8
1940 Female, age 85, left hemisphere 209.1
Hippocampus, CA3
nTPM: 450.6
2861 Female, age 67, both hemispheres 661.9
2137 Male, age 80, left hemisphere 628.7
2620 Female, age 94, left hemisphere 594.0
1867 Male, age 76, both hemispheres 299.8
2436 Male, age 74, both hemispheres 273.9
1891 Female, age 85, both hemispheres 245.1
Parahippocampal cortex
nTPM: 309.1
2245 Female, age 91, both hemispheres 538.6
2622 Female, age 67, right hemisphere 376.3
2693 Female, age 94, both hemispheres 316.0
2250 Female, age 67, right hemisphere 315.6
1990 Female, age 91, right hemisphere 268.1
1933 Female, age 85, both hemispheres 266.5
1850 Male, age 80, both hemispheres 264.5
2532 Female, age 72, left hemisphere 253.6
2692 Male, age 74, both hemispheres 252.8
2018 Male, age 76, both hemispheres 239.0
Perirhinal gyrus
nTPM: 298.6
1847 Female, age 91, left hemisphere 384.8
2521 Female, age 94, right hemisphere 330.3
1794 Male, age 80, right hemisphere 275.9
2848 Male, age 76, right hemisphere 262.2
1841 Female, age 85, right hemisphere 239.7
Subiculum
nTPM: 255.9
1901 Male, age 80, both hemispheres 298.0
2729 Female, age 91, right hemisphere 291.7
2042 Male, age 76, both hemispheres 264.9
2619 Male, age 74, both hemispheres 231.2
2438 Female, age 94, left hemisphere 225.4
1977 Female, age 85, both hemispheres 223.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 162.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 162.1
Samples: 255

Max nTPM: 692.6
Min nTPM: 3.0
Std nTPM: 107.2
Median nTPM: 147.6
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 692.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 477.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 453.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 448.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 433.3
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 427.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 421.0
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 415.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 396.0
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 381.3
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 377.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 499.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 499.5
FF:10169-103B7 60 years, female 501.6
FF:10153-102I9 76 years, female 497.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 279.1
Pig sample Sample description nTPM
Subiculum
nTPM: 227.5
Samples: 4

Max nTPM: 306.2
Min nTPM: 176.5
Sample A Female 306.2
Sample B Female 204.9
Sample C Male 222.2
Sample D Male 176.5
Dorsal hippocampus
nTPM: 276.9
Samples: 4

Max nTPM: 326.4
Min nTPM: 214.2
Sample A Female 326.4
Sample B Female 312.1
Sample C Male 214.2
Sample D Male 254.7
Entorhinal cortex
nTPM: 279.1
Samples: 4

Max nTPM: 325.8
Min nTPM: 244.6
Sample A Female 295.5
Sample B Female 250.5
Sample C Male 325.8
Sample D Male 244.6
Ventral hippocampus
nTPM: 261.7
Samples: 4

Max nTPM: 359.4
Min nTPM: 201.8
Sample A Female 201.8
Sample B Female 202.3
Sample C Male 283.1
Sample D Male 359.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 315.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 294.6
Samples: 4

Max nTPM: 306.0
Min nTPM: 283.0
Sample A Male 299.6
Sample B Male 289.9
Sample C Female 283.0
Sample D Female 306.0
Hippocampal formation
nTPM: 315.5
Samples: 4

Max nTPM: 327.2
Min nTPM: 300.2
Sample A Male 324.9
Sample B Male 327.2
Sample C Female 309.5
Sample D Female 300.2

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