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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:91.1 nTPM
HPA Brain:177.2 nTPM
GTEx:91.1 nTPM
Pig:49.0 nTPM
Mouse:332.6 nTPM
Allen mouse:10.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 129.7
1961 Female, age 42, unknown 141.3
2226 Male, age 75, left hemisphere 118.1
Dorsomedial nucleus
nTPM: 144.2
1989 Male, age 62, unknown 159.7
2041 Female, age 72, unknown 147.0
2017 Female, age 42, unknown 126.1
Lateral hypothalamic area
nTPM: 101.7
1791 Male, age 80, right hemisphere 162.3
2271 Male, age 75, both hemispheres 90.9
2412 Male, age 62, unknown 79.5
2228 Male, age 66, unknown 74.0
Mammillary body
nTPM: 177.2
2413 Male, age 66, unknown 200.3
1923 Female, age 72, unknown 197.6
1945 Male, age 80, right hemisphere 184.3
1834 Female, age 42, unknown 168.3
1948 Female, age 72, unknown 135.2
Paraventricular nucleus
nTPM: 85.6
2700 Male, age 62, unknown 85.6
Preoptic area
nTPM: 136.3
1861 Female, age 42, unknown 170.1
1907 Male, age 80, right hemisphere 149.9
2414 Female, age 72, unknown 89.0
Supraoptic nucleus
nTPM: 152.0
1894 Female, age 72, unknown 195.9
2043 Male, age 62, unknown 161.4
2835 Female, age 72, unknown 98.7
Ventromedial nucleus
nTPM: 149.2
1822 Female, age 42, unknown 154.8
1982 Female, age 72, unknown 143.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 91.1
Samples: 257

Max nTPM: 282.3
Min nTPM: 26.4
Std nTPM: 39.1
Median nTPM: 84.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 282.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 255.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 246.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 224.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 206.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 199.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 186.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 184.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 180.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 175.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 169.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 164.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 161.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 160.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 159.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 159.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 157.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 154.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 154.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 153.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 150.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 150.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 149.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 144.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 141.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 140.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 140.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 138.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 137.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 135.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 134.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 132.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 132.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 132.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 130.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 130.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 130.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 128.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 123.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 123.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 122.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 122.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 120.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 118.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 118.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 118.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 117.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 116.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 114.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 113.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 113.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 111.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 111.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 111.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 110.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 110.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 109.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 108.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 108.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 108.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 108.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 106.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 105.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 105.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 105.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 105.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 105.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 105.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 104.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 104.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 104.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 103.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 102.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 100.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 100.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 100.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 100.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 99.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 99.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 99.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 98.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 98.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 98.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 97.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 96.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 95.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 95.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 95.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 95.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 95.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 94.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 94.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 94.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 94.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 94.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 94.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 93.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 93.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 92.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 92.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 92.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 92.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 91.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 91.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 91.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 91.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 91.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 91.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 91.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 90.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 90.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 90.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 90.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 89.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 89.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 89.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 89.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 89.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 88.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 88.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 87.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 87.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 86.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 85.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 85.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 85.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 85.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 85.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 84.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 83.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 83.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 83.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 83.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 81.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 81.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 81.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 81.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 81.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 80.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 80.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 80.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 80.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 80.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 79.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 79.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 79.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 78.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 78.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 78.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 77.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 77.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 77.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 77.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 76.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 76.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 75.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 75.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 75.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 75.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 74.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 74.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 74.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 74.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 74.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 73.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 73.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 73.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 73.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 73.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 73.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 73.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 72.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 72.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 72.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 72.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 72.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 72.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 71.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 71.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 71.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 71.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 71.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 71.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 71.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 70.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 69.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 69.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 68.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 67.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 67.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 67.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 67.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 66.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 66.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 66.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 66.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 65.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 65.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 65.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 64.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 63.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 63.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 62.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 62.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 61.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 61.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 61.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 61.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 61.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 61.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 60.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 60.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 59.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 59.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 58.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 58.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 58.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 58.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 57.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 57.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 56.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 55.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 55.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 55.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 54.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 54.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 53.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 52.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 52.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 51.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 51.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 48.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 46.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 46.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 45.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 44.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 43.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 43.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 42.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 42.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 42.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 41.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 41.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 40.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 39.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 38.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 37.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 37.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 36.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 36.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 35.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 35.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 34.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 32.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 32.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 31.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 26.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 49.0
Samples: 4

Max nTPM: 63.2
Min nTPM: 35.8
Sample A Female 63.2
Sample B Female 52.2
Sample C Male 44.8
Sample D Male 35.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

332.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 332.7
Samples: 4

Max nTPM: 366.7
Min nTPM: 294.9
Sample A Male 294.9
Sample B Male 366.7
Sample C Female 346.4
Sample D Female 322.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.0
70429429 Antisense, RP_050614_01_F06, Mouse strain C57BL/6J (56 days, male) 11.2
74047768 Antisense, RP_051214_01_H06, Mouse strain C57BL/6J (56 days, male) 8.9

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