HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:193.4 nTPM
HPA Brain:171.1 nTPM
GTEx:193.4 nTPM
FANTOM5:284.3 Scaled Tags Per Million
Pig:108.2 nTPM
Mouse:60.8 nTPM
Allen mouse:2.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036268
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 171.1
Sample id Sample description nTPM
Hippocampus
nTPM: 133.6
2529 Female, age 94, left hemisphere 162.6
1898 Male, age 80, left hemisphere 138.3
1911 Female, age 85, right hemisphere 136.3
2621 Female, age 67, right hemisphere 125.0
2148 Female, age 91, left hemisphere 120.5
1855 Male, age 76, left hemisphere 119.0
Dentate gyrus
nTPM: 130.2
2530 Female, age 94, left hemisphere 168.0
2010 Male, age 76, both hemispheres 141.8
2246 Female, age 85, both hemispheres 130.9
2528 Male, age 74, both hemispheres 129.9
2531 Female, age 67, both hemispheres 114.8
1927 Female, age 91, both hemispheres 95.6
Entorhinal gyrus
nTPM: 171.1
2764 Male, age 80, right hemisphere 200.3
1938 Female, age 85, left hemisphere 193.6
2117 Female, age 91, right hemisphere 169.6
1787 Male, age 76, left hemisphere 160.8
2686 Male, age 75, right hemisphere 154.7
2613 Female, age 94, left hemisphere 147.3
Hippocampus, CA1
nTPM: 128.1
2082 Female, age 91, right hemisphere 143.5
2749 Male, age 80, left hemisphere 139.5
2527 Male, age 74, both hemispheres 131.0
1873 Female, age 85, both hemispheres 121.4
2045 Male, age 76, both hemispheres 105.1
Hippocampus, CA2
nTPM: 133.9
1940 Female, age 85, left hemisphere 160.7
2249 Male, age 74, both hemispheres 136.3
1963 Male, age 80, left hemisphere 134.2
2437 Female, age 94, left hemisphere 133.5
2113 Female, age 91, right hemisphere 130.0
1892 Male, age 76, both hemispheres 108.8
Hippocampus, CA3
nTPM: 128.1
1891 Female, age 85, both hemispheres 148.9
2620 Female, age 94, left hemisphere 143.9
2436 Male, age 74, both hemispheres 128.5
1867 Male, age 76, both hemispheres 117.1
2861 Female, age 67, both hemispheres 116.3
2137 Male, age 80, left hemisphere 114.1
Parahippocampal cortex
nTPM: 145.2
2692 Male, age 74, both hemispheres 178.1
1850 Male, age 80, both hemispheres 173.6
1933 Female, age 85, both hemispheres 163.9
2532 Female, age 72, left hemisphere 162.4
1990 Female, age 91, right hemisphere 153.2
2018 Male, age 76, both hemispheres 139.4
2622 Female, age 67, right hemisphere 131.2
2245 Female, age 91, both hemispheres 125.2
2693 Female, age 94, both hemispheres 113.5
2250 Female, age 67, right hemisphere 111.8
Perirhinal gyrus
nTPM: 148.6
1794 Male, age 80, right hemisphere 178.0
1847 Female, age 91, left hemisphere 156.1
1841 Female, age 85, right hemisphere 144.6
2848 Male, age 76, right hemisphere 135.2
2521 Female, age 94, right hemisphere 129.2
Subiculum
nTPM: 157.5
2042 Male, age 76, both hemispheres 180.3
1977 Female, age 85, both hemispheres 175.9
1901 Male, age 80, both hemispheres 171.5
2438 Female, age 94, left hemisphere 153.7
2619 Male, age 74, both hemispheres 143.3
2729 Female, age 91, right hemisphere 120.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 193.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 193.4
Samples: 255

Max nTPM: 449.1
Min nTPM: 103.2
Std nTPM: 60.1
Median nTPM: 178.2
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 449.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 448.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 432.6
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 427.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 424.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 394.1
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 363.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 356.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 350.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 327.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 321.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 284.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 284.3
FF:10153-102I9 76 years, female 287.2
FF:10169-103B7 60 years, female 281.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 108.2
Pig sample Sample description nTPM
Subiculum
nTPM: 75.8
Samples: 4

Max nTPM: 91.4
Min nTPM: 61.2
Sample A Female 91.4
Sample B Female 79.2
Sample C Male 71.5
Sample D Male 61.2
Dorsal hippocampus
nTPM: 108.2
Samples: 4

Max nTPM: 149.2
Min nTPM: 61.0
Sample A Female 149.2
Sample B Female 97.0
Sample C Male 125.6
Sample D Male 61.0
Entorhinal cortex
nTPM: 63.8
Samples: 4

Max nTPM: 68.0
Min nTPM: 60.8
Sample A Female 60.8
Sample B Female 68.0
Sample C Male 63.6
Sample D Male 62.9
Ventral hippocampus
nTPM: 88.8
Samples: 4

Max nTPM: 109.3
Min nTPM: 62.9
Sample A Female 88.8
Sample B Female 62.9
Sample C Male 94.3
Sample D Male 109.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 60.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.8
Samples: 4

Max nTPM: 68.4
Min nTPM: 51.6
Sample A Male 68.4
Sample B Male 67.1
Sample C Female 56.1
Sample D Female 51.6
Hippocampal formation
nTPM: 57.6
Samples: 4

Max nTPM: 60.7
Min nTPM: 54.9
Sample A Male 54.9
Sample B Male 54.9
Sample C Female 60.0
Sample D Female 60.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
564753 Antisense, RP_040826_01_C09, Mouse strain C57BL/6J (56 days, male) 2.1

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