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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FRONTAL CORTEX FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTAL AREA SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:119.7 nTPM
HPA Brain:165.9 nTPM
GTEx:119.7 nTPM
FANTOM5:162.9 Scaled Tags Per Million
Macaque:221.5 nTPM
Rat:165.0 nTPM
Pig:331.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 1119
Sample Intensity
Spinal cord_01
ND
Spinal cord_02
ND
Spinal cord_03
692
Spinal cord_04
2019
Spinal cord_05
1358
Spinal cord_06
ND
Spinal cord_07
ND
Spinal cord_08
880

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

165.9
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 143.3
2819 Male, age 47, both hemispheres 195.9
2193 Male, age 75, both hemispheres 149.4
2734 Male, age 80, both hemispheres 141.4
2818 Female, age 79, both hemispheres 86.4
Cervical spinal cord, central gray
nTPM: 162.9
2194 Female, age 79, both hemispheres 215.3
1981 Female, age 72, midline 194.0
2048 Male, age 55, midline 147.3
2816 Male, age 47, midline 130.0
2565 Male, age 75, midline 128.0
Cervical spinal cord, dorsal horn
nTPM: 152.3
2173 Female, age 72, unknown 236.6
2721 Male, age 90, both hemispheres 163.0
2069 Male, age 47, both hemispheres 150.7
2297 Male, age 75, both hemispheres 143.4
1877 Male, age 55, unknown 110.3
2296 Male, age 66, both hemispheres 109.6
Cervical spinal cord, ventral horn
nTPM: 165.9
2068 Male, age 55, unknown 212.0
2820 Female, age 79, both hemispheres 190.4
2098 Female, age 72, unknown 168.6
2295 Male, age 66, both hemispheres 143.7
2809 Male, age 90, both hemispheres 141.1
2480 Male, age 75, both hemispheres 139.5
Dorsal funiculus (white matter)
nTPM: 105.6
2812 Male, age 66, both hemispheres 131.1
2128 Male, age 75, both hemispheres 120.8
2810 Male, age 90, both hemispheres 109.8
2817 Male, age 47, both hemispheres 86.9
2064 Female, age 79, both hemispheres 79.3
Lateral funiculus (white matter)
nTPM: 132.1
2294 Male, age 66, both hemispheres 158.1
2192 Male, age 75, both hemispheres 134.1
2099 Male, age 90, both hemispheres 129.3
2094 Female, age 79, both hemispheres 106.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 119.7
Samples: 204

Max nTPM: 388.2
Min nTPM: 70.1
Std nTPM: 43.1
Median nTPM: 108.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 388.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 382.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 246.1
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 238.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 235.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 214.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 214.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 214.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 213.7
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 212.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 210.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 204.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 203.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 186.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 186.6
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 186.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 180.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 178.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 175.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 175.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 164.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 163.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 162.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 162.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 160.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 160.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 160.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 146.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 145.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 145.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 143.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 142.2
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 141.8
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 141.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 139.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 139.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 137.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 137.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 137.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 136.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 135.6
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 135.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 134.4
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 133.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 133.3
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 132.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 131.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 130.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 130.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 129.5
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 129.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 128.5
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 128.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 126.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 125.8
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 125.7
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 125.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 124.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 124.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 124.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 124.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 123.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 122.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 122.7
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 122.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 122.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 121.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 120.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 120.8
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 120.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 120.7
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 120.4
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 120.3
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 119.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 119.8
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 118.5
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 118.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 118.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 118.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 117.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 117.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 117.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 116.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 116.3
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 115.3
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 115.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 115.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 114.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 113.9
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 112.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 112.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 112.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 112.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 112.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 111.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 111.2
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 110.9
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 110.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 110.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 110.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 110.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 109.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 108.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 108.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 107.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 107.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 107.0
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 107.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 106.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 106.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 106.0
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 105.9
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 105.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 104.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 104.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 104.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 104.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 103.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 103.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 103.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 103.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 102.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 102.6
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 102.3
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 102.1
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 101.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 101.5
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 101.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 101.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 101.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 100.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 99.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 98.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 98.5
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 98.4
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 98.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 97.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 97.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 96.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 96.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 96.8
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 96.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 96.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 95.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 95.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 95.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 95.4
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 95.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 94.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 94.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 94.4
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 94.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 93.6
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 93.4
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 93.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 93.1
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 92.9
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 92.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 92.7
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 92.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 92.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 92.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 92.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 92.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 92.1
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 91.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 91.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 91.1
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 90.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 90.1
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 89.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 89.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 88.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 88.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 88.1
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 87.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 87.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 87.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 87.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 87.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 87.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 86.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 86.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 86.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 85.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 85.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 84.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 84.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 83.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 83.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 81.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 80.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 80.2
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 79.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 79.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 78.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 77.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 76.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 75.5
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 74.5
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 72.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 70.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 70.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 70.1
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

162.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 162.9
FF:10181-103D1 60 years, female 209.0
FF:10159-103A6 76 years, female 116.7

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

221.5
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 182.2
Samples: 2

Max nTPM: 236.4
Min nTPM: 128.0
Sample A 128.0
Sample B 236.4
Ventral spinal cord
nTPM: 221.5
Samples: 1

Max nTPM: 221.5
Min nTPM: 221.5
Sample A 221.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

331.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 292.4
Samples: 4

Max nTPM: 347.3
Min nTPM: 245.0
Sample A Female 245.0
Sample B Female 261.3
Sample C Male 347.3
Sample D Male 316.0
Ventral spinal cord
nTPM: 331.6
Samples: 4

Max nTPM: 428.0
Min nTPM: 259.1
Sample A Female 259.1
Sample B Female 308.6
Sample C Male 428.0
Sample D Male 330.5

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

165.0
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 165.0
Samples: 4

Max nTPM: 174.7
Min nTPM: 151.0
Sample A 174.7
Sample A 167.4
Sample A 166.9
Sample A 151.0

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