HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:221.6 nTPM
HPA Brain:183.9 nTPM
GTEx:221.6 nTPM
FANTOM5:223.4 Scaled Tags Per Million
Pig:350.7 nTPM
Mouse:250.8 nTPM
Allen mouse:18.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047820Antibody CAB035994
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 183.9
Sample id Sample description nTPM
Hippocampus
nTPM: 175.9
1898 Male, age 80, left hemisphere 220.9
1855 Male, age 76, left hemisphere 184.6
1911 Female, age 85, right hemisphere 171.5
2621 Female, age 67, right hemisphere 171.0
2529 Female, age 94, left hemisphere 155.7
2148 Female, age 91, left hemisphere 152.0
Dentate gyrus
nTPM: 163.8
2010 Male, age 76, both hemispheres 217.4
2530 Female, age 94, left hemisphere 191.1
1927 Female, age 91, both hemispheres 176.4
2246 Female, age 85, both hemispheres 146.4
2528 Male, age 74, both hemispheres 131.3
2531 Female, age 67, both hemispheres 120.5
Entorhinal gyrus
nTPM: 160.8
2764 Male, age 80, right hemisphere 186.4
2117 Female, age 91, right hemisphere 168.8
1938 Female, age 85, left hemisphere 168.7
1787 Male, age 76, left hemisphere 166.0
2686 Male, age 75, right hemisphere 141.4
2613 Female, age 94, left hemisphere 133.5
Hippocampus, CA1
nTPM: 183.9
2749 Male, age 80, left hemisphere 294.0
1873 Female, age 85, both hemispheres 206.7
2045 Male, age 76, both hemispheres 154.1
2527 Male, age 74, both hemispheres 144.5
2082 Female, age 91, right hemisphere 120.1
Hippocampus, CA2
nTPM: 180.6
1963 Male, age 80, left hemisphere 232.1
1892 Male, age 76, both hemispheres 212.7
2249 Male, age 74, both hemispheres 186.3
1940 Female, age 85, left hemisphere 181.3
2437 Female, age 94, left hemisphere 144.5
2113 Female, age 91, right hemisphere 126.7
Hippocampus, CA3
nTPM: 159.4
2137 Male, age 80, left hemisphere 234.1
1867 Male, age 76, both hemispheres 197.7
1891 Female, age 85, both hemispheres 164.0
2620 Female, age 94, left hemisphere 129.3
2436 Male, age 74, both hemispheres 118.4
2861 Female, age 67, both hemispheres 112.6
Parahippocampal cortex
nTPM: 151.2
1990 Female, age 91, right hemisphere 176.9
2018 Male, age 76, both hemispheres 174.5
1850 Male, age 80, both hemispheres 173.1
2532 Female, age 72, left hemisphere 159.5
1933 Female, age 85, both hemispheres 159.4
2245 Female, age 91, both hemispheres 146.9
2250 Female, age 67, right hemisphere 143.0
2622 Female, age 67, right hemisphere 132.3
2692 Male, age 74, both hemispheres 124.9
2693 Female, age 94, both hemispheres 121.2
Perirhinal gyrus
nTPM: 162.8
1794 Male, age 80, right hemisphere 171.9
1841 Female, age 85, right hemisphere 170.3
1847 Female, age 91, left hemisphere 169.7
2848 Male, age 76, right hemisphere 156.3
2521 Female, age 94, right hemisphere 145.7
Subiculum
nTPM: 175.7
1901 Male, age 80, both hemispheres 198.2
2042 Male, age 76, both hemispheres 197.3
1977 Female, age 85, both hemispheres 183.1
2438 Female, age 94, left hemisphere 169.6
2729 Female, age 91, right hemisphere 163.3
2619 Male, age 74, both hemispheres 143.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 221.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 221.6
Samples: 255

Max nTPM: 446.4
Min nTPM: 130.1
Std nTPM: 45.3
Median nTPM: 212.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 446.4
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 422.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 405.7
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 371.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 358.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 349.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 345.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 326.2
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 316.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 312.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 309.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 223.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 223.4
FF:10169-103B7 60 years, female 261.7
FF:10153-102I9 76 years, female 185.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 350.7
Pig sample Sample description nTPM
Subiculum
nTPM: 271.2
Samples: 4

Max nTPM: 343.6
Min nTPM: 227.7
Sample A Female 343.6
Sample B Female 253.7
Sample C Male 259.9
Sample D Male 227.7
Dorsal hippocampus
nTPM: 350.7
Samples: 4

Max nTPM: 495.5
Min nTPM: 245.7
Sample A Female 495.5
Sample B Female 342.7
Sample C Male 319.0
Sample D Male 245.7
Entorhinal cortex
nTPM: 232.1
Samples: 4

Max nTPM: 250.8
Min nTPM: 197.0
Sample A Female 250.8
Sample B Female 231.2
Sample C Male 249.5
Sample D Male 197.0
Ventral hippocampus
nTPM: 311.2
Samples: 4

Max nTPM: 370.7
Min nTPM: 224.3
Sample A Female 302.9
Sample B Female 224.3
Sample C Male 347.0
Sample D Male 370.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 250.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 229.3
Samples: 4

Max nTPM: 247.1
Min nTPM: 217.0
Sample A Male 223.1
Sample B Male 217.0
Sample C Female 230.0
Sample D Female 247.1
Hippocampal formation
nTPM: 250.8
Samples: 4

Max nTPM: 283.1
Min nTPM: 227.3
Sample A Male 248.4
Sample B Male 244.5
Sample C Female 283.1
Sample D Female 227.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 18.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.0
68191504 Antisense, RP_041129_01_C10, Mouse strain C57BL/6J (56 days, male) 18.0

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