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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • CCM2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:78.9 nTPM
GTEx:135.4 nTPM
FANTOM5:97.2 Scaled Tags Per Million
Macaque:40.2 nTPM
Pig:74.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.9
Sample id Sample description nTPM
Putamen
nTPM: 78.9
2489 Female, age 72, unknown 87.7
1838 Male, age 80, right hemisphere 85.3
2466 Female, age 79, unknown 84.3
2647 Male, age 75, left hemisphere 79.9
1937 Female, age 91, right hemisphere 76.0
1829 Male, age 74, unknown 74.5
2482 Female, age 94, left hemisphere 64.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 135.4
Samples: 254

Max nTPM: 346.3
Min nTPM: 50.4
Std nTPM: 45.4
Median nTPM: 132.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 346.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 270.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 247.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 243.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 241.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 231.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 230.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 223.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 222.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 217.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 216.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 214.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 212.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 212.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 212.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 209.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 209.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 208.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 208.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 206.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 200.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 200.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 200.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 199.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 198.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 192.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 191.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 189.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 188.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 188.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 187.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 186.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 185.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 185.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 184.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 184.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 183.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 180.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 179.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 179.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 179.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 179.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 179.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 178.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 177.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 177.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 176.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 176.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 175.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 175.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 173.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 173.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 172.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 172.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 170.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 170.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 170.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 170.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 170.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 169.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 169.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 169.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 168.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 167.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 165.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 164.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 163.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 163.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 163.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 161.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 160.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 160.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 160.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 158.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 158.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 157.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 157.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 156.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 156.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 156.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 155.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 154.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 152.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 151.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 150.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 150.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 150.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 150.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 149.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 149.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 147.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 146.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 145.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 145.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 144.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 144.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 142.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 142.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 142.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 142.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 141.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 141.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 140.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 140.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 140.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 140.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 140.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 140.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 138.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 138.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 138.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 138.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 136.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 136.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 135.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 135.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 135.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 135.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 135.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 135.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 134.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 134.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 133.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 133.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 133.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 133.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 132.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 132.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 132.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 130.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 130.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 130.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 129.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 128.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 128.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 127.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 126.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 126.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 126.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 126.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 126.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 125.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 125.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 125.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 124.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 124.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 123.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 123.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 122.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 122.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 122.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 121.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 121.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 121.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 120.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 120.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 119.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 119.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 119.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 119.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 119.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 119.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 118.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 118.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 118.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 115.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 115.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 114.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 113.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 112.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 111.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 107.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 107.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 107.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 107.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 106.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 106.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 106.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 106.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 105.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 105.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 105.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 105.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 105.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 104.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 104.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 103.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 103.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 103.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 103.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 102.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 102.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 102.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 100.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 100.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 100.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 99.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 97.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 97.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 96.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 96.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 95.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 95.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 95.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 95.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 94.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 94.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 94.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 93.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 92.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 91.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 91.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 90.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 89.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 87.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 87.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 85.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 84.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 84.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 84.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 84.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 82.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 82.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 81.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 81.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 81.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 80.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 80.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 78.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 78.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 76.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 76.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 75.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 75.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 72.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 72.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 70.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 70.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 69.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 67.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 67.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 66.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 65.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 65.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 65.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 63.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 60.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 59.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 58.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 57.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 55.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 54.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 50.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

97.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 97.2
FF:10176-103C5 60 years, female 97.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.2
Macaque sample Sample description nTPM
Putamen
nTPM: 40.2
Samples: 2

Max nTPM: 40.7
Min nTPM: 39.7
Sample A 40.7
Sample B 39.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.3
Pig sample Sample description nTPM
Putamen
nTPM: 74.3
Samples: 3

Max nTPM: 95.9
Min nTPM: 61.6
Sample B Female 65.4
Sample C Male 95.9
Sample D Male 61.6

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