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BETA
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  • RPS6KC1
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:6.8 nTPM
Monaco:44.5 nTPM
Schmiedel:30.1 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

6.8
HPA sample nTPM
Classical monocyte
nTPM: 4.5
Samples: 6

Max nTPM: 5.4
Min nTPM: 3.1
P10809_1003 5.4
P10809_1020 4.6
P10809_1039 3.1
P10809_1058 4.4
P10809_1080 5.3
P10809_1107 4.0
Intermediate monocyte
nTPM: 6.4
Samples: 6

Max nTPM: 11.1
Min nTPM: 2.7
P10809_1004 6.9
P10809_1023 2.7
P10809_1042 8.0
P10809_1061 11.1
P10809_1081 5.9
P10809_1108 3.8
Non-classical monocyte
nTPM: 6.8
Samples: 5

Max nTPM: 15.3
Min nTPM: 4.2
P10809_1005 4.9
P10809_1053 4.6
P10809_1072 15.3
P10809_1082 4.2
P10809_1109 4.9

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

44.5
Monaco sample nTPM
Classical monocyte
nTPM: 40.6
Samples: 4

Max nTPM: 44.0
Min nTPM: 37.5
RHH5313_R3680 37.5
RHH5221_R3593 40.2
RHH5250_R3622 44.0
RHH5279_R3651 40.7
Intermediate monocyte
nTPM: 34.7
Samples: 4

Max nTPM: 52.1
Min nTPM: 24.5
RHH5314_R3681 28.3
RHH5222_R3594 52.1
RHH5251_R3623 24.5
RHH5280_R3652 33.8
Non-classical monocyte
nTPM: 44.6
Samples: 4

Max nTPM: 51.5
Min nTPM: 38.2
RHH5315_R3682 38.2
RHH5223_R3595 39.3
RHH5252_R3624 51.5
RHH5281_R3653 49.2

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

30.1
Schmiedel sample id TPM
Classical monocyte
TPM: 23.6
Samples: 91

Max TPM: 32.2
Min TPM: 16.1
MONOCYTES_1 32.2
MONOCYTES_2 30.4
MONOCYTES_3 30.3
MONOCYTES_4 30.0
MONOCYTES_5 29.2
MONOCYTES_6 29.2
MONOCYTES_7 29.0
MONOCYTES_8 28.1
MONOCYTES_9 27.9
MONOCYTES_10 27.7
MONOCYTES_11 27.6
MONOCYTES_12 27.6
MONOCYTES_13 27.6
MONOCYTES_14 27.5
MONOCYTES_15 27.3
MONOCYTES_16 27.3
MONOCYTES_17 27.0
MONOCYTES_18 26.9
MONOCYTES_19 26.5
MONOCYTES_20 26.4
MONOCYTES_21 26.4
MONOCYTES_22 26.3
MONOCYTES_23 26.1
MONOCYTES_24 25.6
MONOCYTES_25 25.5
MONOCYTES_26 25.2
MONOCYTES_27 25.1
MONOCYTES_28 25.0
MONOCYTES_29 24.9
MONOCYTES_30 24.8
MONOCYTES_31 24.7
MONOCYTES_32 24.7
MONOCYTES_33 24.6
MONOCYTES_34 24.6
MONOCYTES_35 24.5
MONOCYTES_36 24.3
MONOCYTES_37 24.1
MONOCYTES_38 24.1
MONOCYTES_39 24.1
MONOCYTES_40 24.0
MONOCYTES_41 24.0
MONOCYTES_42 23.7
MONOCYTES_43 23.6
MONOCYTES_44 23.4
MONOCYTES_45 23.2
MONOCYTES_46 23.0
MONOCYTES_47 22.9
MONOCYTES_48 22.8
MONOCYTES_49 22.5
MONOCYTES_50 22.5
MONOCYTES_51 22.5
MONOCYTES_52 22.3
MONOCYTES_53 22.3
MONOCYTES_54 22.2
MONOCYTES_55 22.1
MONOCYTES_56 22.1
MONOCYTES_57 22.0
MONOCYTES_58 21.9
MONOCYTES_59 21.9
MONOCYTES_60 21.9
MONOCYTES_61 21.9
MONOCYTES_62 21.7
MONOCYTES_63 21.6
MONOCYTES_64 21.6
MONOCYTES_65 21.5
MONOCYTES_66 21.5
MONOCYTES_67 21.4
MONOCYTES_68 21.1
MONOCYTES_69 21.1
MONOCYTES_70 20.9
MONOCYTES_71 20.9
MONOCYTES_72 20.9
MONOCYTES_73 20.8
MONOCYTES_74 20.8
MONOCYTES_75 20.8
MONOCYTES_76 20.6
MONOCYTES_77 20.5
MONOCYTES_78 20.5
MONOCYTES_79 20.5
MONOCYTES_80 20.5
MONOCYTES_81 20.4
MONOCYTES_82 20.4
MONOCYTES_83 20.3
MONOCYTES_84 20.0
MONOCYTES_85 19.7
MONOCYTES_86 19.4
MONOCYTES_87 19.2
MONOCYTES_88 19.0
MONOCYTES_89 18.7
MONOCYTES_90 17.4
MONOCYTES_91 16.1
Show allShow less
Non-classical monocyte
TPM: 30.1
Samples: 90

Max TPM: 44.9
Min TPM: 20.5
M2_1 44.9
M2_2 41.9
M2_3 41.3
M2_4 40.0
M2_5 39.8
M2_6 39.5
M2_7 39.2
M2_8 39.0
M2_9 38.4
M2_10 36.1
M2_11 36.1
M2_12 36.0
M2_13 36.0
M2_14 35.2
M2_15 35.1
M2_16 34.8
M2_17 34.7
M2_18 34.4
M2_19 34.2
M2_20 33.9
M2_21 33.4
M2_22 32.5
M2_23 32.4
M2_24 32.3
M2_25 32.3
M2_26 32.3
M2_27 32.2
M2_28 31.8
M2_29 31.8
M2_30 31.8
M2_31 31.8
M2_32 31.6
M2_33 31.0
M2_34 30.9
M2_35 30.8
M2_36 30.7
M2_37 30.7
M2_38 30.6
M2_39 30.2
M2_40 30.0
M2_41 29.8
M2_42 29.5
M2_43 29.4
M2_44 29.4
M2_45 29.1
M2_46 29.0
M2_47 28.8
M2_48 28.7
M2_49 28.7
M2_50 28.4
M2_51 28.4
M2_52 28.3
M2_53 28.2
M2_54 28.1
M2_55 27.9
M2_56 27.8
M2_57 27.8
M2_58 27.8
M2_59 27.7
M2_60 27.5
M2_61 27.4
M2_62 27.4
M2_63 27.4
M2_64 27.4
M2_65 27.2
M2_66 27.2
M2_67 26.8
M2_68 26.7
M2_69 26.5
M2_70 26.5
M2_71 26.4
M2_72 26.2
M2_73 25.7
M2_74 25.6
M2_75 25.3
M2_76 25.3
M2_77 24.9
M2_78 24.5
M2_79 24.5
M2_80 24.4
M2_81 24.3
M2_82 24.3
M2_83 24.1
M2_84 24.0
M2_85 23.9
M2_86 23.1
M2_87 22.8
M2_88 22.7
M2_89 22.0
M2_90 20.5
Show allShow less

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